RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 PRAM1Q96QH2 718 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 KRT12Q99456 494 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 NKX3-1Q99801 234 aaPredicted RBP1.93□□□□□ -2.1
ITGB1-213ENST00000484088 CCM2Q9BSQ5 444 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 CLEC7AQ9BXN2 247 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 NUSAP1Q9BXS6 441 aaKnown RBP1.93□□□□□ -2.1
ITGB1-213ENST00000484088 PANK2Q9BZ23 570 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 PITPNM3Q9BZ71 974 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 TRIM7Q9C029 511 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 GFRA4Q9GZZ7 299 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 IQCGQ9H095 443 aaKnown RBP1.93□□□□□ -2.1
ITGB1-213ENST00000484088 COMMD8Q9NX08 183 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 CYP39A1Q9NYL5 469 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 SPG21Q9NZD8 308 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 HACD3Q9P035 362 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 KLHL8Q9P2G9 620 aaPredicted RBP1.93□□□□□ -2.1
ITGB1-213ENST00000484088 C19orf25Q9UFG5 118 aaPredicted RBP1.93□□□□□ -2.1
ITGB1-213ENST00000484088 SUN2Q9UH99 717 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 PCSK1NQ9UHG2 260 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 XPO7Q9UIA9 1087 aaKnown RBP1.93□□□□□ -2.1
ITGB1-213ENST00000484088 PILRAQ9UKJ1 303 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 POMT2Q9UKY4 750 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 MRPS28Q9Y2Q9 187 aaKnown RBP1.93□□□□□ -2.1
ITGB1-213ENST00000484088 RAD54L2Q9Y4B4 1467 aa1.93□□□□□ -2.1
ITGB1-213ENST00000484088 ACEP12821 1306 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 MYH14Q7Z406 1995 aaKnown RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 IGHV3-38A0A0C4DH36 116 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 A0A1B0GVY2 172 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ATP6AP2A0A1C7CYW4 349 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 A0A1W2PRV1 198 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 MAGEB16A2A368 324 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ERICH4A6NGS2 130 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 TMEM110-MUSTN1A8MSY1 372 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 A8MU76 341 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 A8MVM7 634 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 K7EQD1 137 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 E2F6O75461 281 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ATP6V1B1P15313 513 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 PAX7P23759 505 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 HLA-FP30511 346 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 MMP12P39900 470 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 MAGEA8P43361 318 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 SLC6A12P48065 614 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 KIAA1024LP59773 190 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 KCNJ10P78508 379 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 AKAP17AQ02040 695 aaKnown RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 COX10Q12887 443 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 CALCOCO2Q13137 446 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 RCN2Q14257 317 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 SYCP1Q15431 976 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 STXBP2Q15833 593 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ZFP69Q49AA0 526 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 LRRC37A5PQ49AS3 106 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 TEX35Q5T0J7 233 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 OTUD3Q5T2D3 398 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ATP1A1-AS1Q5TC04 95 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ZNF776Q68DI1 518 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ADAM5Q6NVV9 412 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 TRIM65Q6PJ69 517 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 C17orf107Q6ZR85 190 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 C15orf52Q6ZUT6 534 aaKnown RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 TRMT11Q7Z4G4 463 aaKnown RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 TEX9Q8N6V9 391 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 NIPA2Q8N8Q9 360 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 WDSUB1Q8N9V3 476 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 SMYD1Q8NB12 490 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 CLEC1AQ8NC01 280 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 SSC4DQ8WTU2 575 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 C17orf50Q8WW18 174 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 SLC35C1Q96A29 364 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 WBP1Q96G27 269 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 POM121L2Q96KW2 1035 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ART5Q96L15 291 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 NSMCE3Q96MG7 304 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 AGAP3Q96P47 875 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 ATP6V0BQ99437 205 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 C17orf62Q9BQA9 187 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 NTMT1Q9BV86 223 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 MRPL9Q9BYD2 267 aaKnown RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 XPO4Q9C0E2 1151 aaKnown RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 WWTR1Q9GZV5 400 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 HOXD1Q9GZZ0 328 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 PARLQ9H300 379 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 RNF121Q9H920 327 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 RNPEPL1Q9HAU8 725 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 MAGEF1Q9HAY2 307 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 MID1IP1Q9NPA3 183 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 PPANQ9NQ55 473 aaKnown RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 EXOC1Q9NV70 894 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 C6orf203Q9P0P8 240 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 THAP10Q9P2Z0 257 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 EPS15L1Q9UBC2 864 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 UBQLN2Q9UHD9 624 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 APPL1Q9UKG1 709 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 RABL2BQ9UNT1 228 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 SATB2Q9UPW6 733 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 PPP1R3CQ9UQK1 317 aa1.92□□□□□ -2.1
ITGB1-213ENST00000484088 FOXA2Q9Y261 457 aaPredicted RBP1.92□□□□□ -2.1
ITGB1-213ENST00000484088 DHX29Q7Z478 1369 aaKnown RBP1.91□□□□□ -2.1
ITGB1-213ENST00000484088 A0A1W2PPR1 153 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms