RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 TMEM132DQ14C87 1099 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 EFTUD2Q15029 972 aaKnown RBP eCLIP3.33□□□□□ -1.88
CBX3-207ENST00000481300 E2F5Q15329 346 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 MEP1BQ16820 701 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 HLA-BQ31612 363 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 CCDC158Q5M9N0 1113 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.33□□□□□ -1.88
CBX3-207ENST00000481300 PRSS55Q6UWB4 352 aaPredicted RBP3.33□□□□□ -1.88
CBX3-207ENST00000481300 LEKR1Q6ZMV7 388 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 GBP6Q6ZN66 633 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 PRUNE1Q86TP1 453 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 ANKRD46Q86W74 232 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 IQCA1Q86XH1 822 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 CREBRFQ8IUR6 639 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 DCLK2Q8N568 766 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 TCEANCQ8N8B7 351 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 WDSUB1Q8N9V3 476 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 OR2T6Q8NHC8 308 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 TEKT1Q969V4 418 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 SGF29Q96ES7 293 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 ZNF486Q96H40 463 aaPredicted RBP3.33□□□□□ -1.88
CBX3-207ENST00000481300 RBM41Q96IZ5 413 aaKnown RBP3.33□□□□□ -1.88
CBX3-207ENST00000481300 ART5Q96L15 291 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 PLEKHF1Q96S99 279 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 UBQLN3Q9H347 655 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 TMEM206Q9H813 350 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 C10orf88Q9H8K7 445 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 IARS2Q9NSE4 1012 aaKnown RBP3.33□□□□□ -1.88
CBX3-207ENST00000481300 ABCB8Q9NUT2 735 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 TMEM161AQ9NX61 479 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 CACNG5Q9UF02 275 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 LEF1Q9UJU2 399 aaPredicted RBP3.33□□□□□ -1.88
CBX3-207ENST00000481300 ANGPTL3Q9Y5C1 460 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 FLT4P35916 1363 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 KIF24Q5T7B8 1368 aa3.33□□□□□ -1.88
CBX3-207ENST00000481300 ILVBLA1L0T0 632 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 A4D1N5 150 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 C15orf61A6NNL5 157 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 H3BMM5 538 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 SLC1A7O00341 560 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 SLC33A1O00400 549 aaPredicted RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 SLC7A4O43246 635 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 CYTIPO60759 359 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 CRCPO75575 148 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 RAD51DO75771 328 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 RNF224P0DH78 156 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 EEF2P13639 858 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 ITIH1P19827 911 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 AADACP22760 399 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 RBMS1P29558 406 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 OR3A3P47888 321 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 OR3A2P47893 321 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 CETN1Q12798 172 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 CDH18Q13634 790 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 TYSND1Q2T9J0 566 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 IQCCQ4KMZ1 466 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 ZNF542PQ5EBM4 170 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 BSPRYQ5W0U4 402 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 OR4C11Q6IEV9 310 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 MACC1Q6ZN28 852 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 CHMP1BQ7LBR1 199 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 CPEB2Q7Z5Q1 589 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 CCDC91Q7Z6B0 441 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 SYCP3Q8IZU3 236 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 KIAA0895Q8NCT3 520 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 OR7G3Q8NG95 312 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 OR5T2Q8NGG2 359 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 CKAP2Q8WWK9 683 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 TSSK2Q96PF2 358 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 HNRNPABQ99729 332 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 PIGQQ9BRB3 760 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 GPATCH1Q9BRR8 931 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 ATG101Q9BSB4 218 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 ALKBH7Q9BT30 221 aaPredicted RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 TDRD1Q9BXT4 1180 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 DNAI2Q9GZS0 605 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 EGLN3Q9H6Z9 239 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 PANK4Q9NVE7 773 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 SLCO1C1Q9NYB5 712 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 TMOD3Q9NYL9 352 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 HACD3Q9P035 362 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 NOCTQ9UK39 431 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 FBXL5Q9UKA1 691 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 PA2G4Q9UQ80 394 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 ITM2BQ9Y287 266 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 NCKAP1Q9Y2A7 1128 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 KLK4Q9Y5K2 254 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 RTL1A6NKG5 1358 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 BLMP54132 1417 aaPredicted RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 TNS3Q68CZ2 1445 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 SMG6Q86US8 1419 aaKnown RBP3.32□□□□□ -1.88
CBX3-207ENST00000481300 MYO5BQ9ULV0 1848 aa3.32□□□□□ -1.88
CBX3-207ENST00000481300 KNDC1Q76NI1 1749 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 CDK12Q9NYV4 1490 aaPredicted RBP3.31□□□□□ -1.88
CBX3-207ENST00000481300 CPDO75976 1380 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 KIAA0232Q92628 1395 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 A0A0B4J203 849 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 A0A1W2PR80 420 aa3.31□□□□□ -1.88
CBX3-207ENST00000481300 SDR42E2A6NKP2 422 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms