RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 HIST1H1TP22492 207 aaPredicted RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 ATP5A1P25705 553 aaKnown RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 CSTF2P33240 577 aaKnown RBP eCLIP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 RAP1GDS1P52306 607 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 NME5P56597 212 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 STXBP1P61764 594 aaKnown RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 BTN3A2P78410 334 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 ACY1Q03154 408 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 EMX2Q04743 252 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 FOXM1Q08050 763 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 RUNX2Q13950 521 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 PRSS53Q2L4Q9 553 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 DEFB134Q4QY38 66 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 GKAP1Q5VSY0 366 aaPredicted RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 OR4C11Q6IEV9 310 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 MRM1Q6IN84 353 aaKnown RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 GALNT18Q6P9A2 607 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 TRIM40Q6P9F5 258 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 NUDT13Q86X67 352 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 TMEM151BQ8IW70 566 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 ACOT4Q8N9L9 421 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 CCDC197Q8NCU1 140 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 AGBL5Q8NDL9 886 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 OR9I1Q8NGQ6 314 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 OR9A4Q8NGU2 314 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 CEP70Q8NHQ1 597 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 UCN3Q969E3 161 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 RGMAQ96B86 450 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 RILPQ96NA2 401 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 TSSK3Q96PN8 268 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 KCNC2Q96PR1 638 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 DEPDC7Q96QD5 511 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 CSF3RQ99062 836 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 BRINP2Q9C0B6 783 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 MYLK2Q9H1R3 596 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 FANCEQ9HB96 536 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 PRM3Q9NNZ6 103 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 SAR1AQ9NR31 198 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 CUTCQ9NTM9 273 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 IRAK4Q9NWZ3 460 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 SIRT5Q9NXA8 310 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 ARMCX1Q9P291 453 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 DHCR7Q9UBM7 475 aaKnown RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 EXO1Q9UQ84 846 aaKnown RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 CLCA2Q9UQC9 943 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 APOBEC2Q9Y235 224 aaKnown RBP8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 NAALAD2Q9Y3Q0 740 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 GPR45Q9Y5Y3 372 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 PIEZO1Q92508 2521 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 SPTBN2O15020 2390 aa8.5□□□□□ -1.05
NUDCD3-208ENST00000480209 NUP214P35658 2090 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 CCDC187A0A096LP49 1063 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 B4E171 279 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 UBDO15205 165 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 ANXA4P09525 319 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 ACPPP15309 386 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 NCF2P19878 526 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 GPX3P22352 226 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 IL12AP29459 219 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 TSPAN7P41732 249 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 HNRNPFP52597 415 aaKnown RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 EFNA3P52797 238 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 UFM1P61960 85 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 MC2RQ01718 297 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 TARDBPQ13148 414 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 GRM7Q14831 915 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 TERF2Q15554 542 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 SYT16Q17RD7 645 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 SMU1Q2TAY7 513 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 C3orf38Q5JPI3 329 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 TCTE1Q5JU00 501 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 GARNL3Q5VVW2 1013 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 ZNF385CQ66K41 422 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 FOXR1Q6PIV2 292 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 CYP20A1Q6UW02 462 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 COX15Q7KZN9 410 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 RAB11FIP2Q7L804 512 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 SPATA19Q7Z5L4 167 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 MTDHQ86UE4 582 aaKnown RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 TREML1Q86YW5 311 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 CACNA2D3Q8IZS8 1091 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 CA13Q8N1Q1 262 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 KRTCAP2Q8N6L1 136 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 ANKS4BQ8N8V4 417 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 TMEM52Q8NDY8 209 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 C16orf78Q8WTQ4 265 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 ADAMTS14Q8WXS8 1223 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 N4BP2L2Q92802 583 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 CCDC106Q9BWC9 280 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 RBCK1Q9BYM8 510 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 NLNQ9BYT8 704 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 STRADBQ9C0K7 418 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 DDX31Q9H8H2 851 aaKnown RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 SDR39U1Q9NRG7 319 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 NOP53Q9NZM5 478 aaKnown RBP8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 HCN3Q9P1Z3 774 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 PISDQ9UG56 409 aa8.49□□□□□ -1.05
NUDCD3-208ENST00000480209 MCM8Q9UJA3 840 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms