RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ERICH5Q6P6B1 374 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 C19orf48Q6RUI8 117 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 DPY19L3Q6ZPD9 716 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 LGI4Q8N135 537 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 LMNTD1Q8N9Z9 388 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 OR2AP1Q8NGE2 309 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 TMEM169Q96HH4 297 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 MTERF1Q99551 399 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 MTG2Q9H4K7 406 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 ZDHHC6Q9H6R6 413 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 NUFIP1Q9UHK0 495 aaKnown RBP12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 ITM2BQ9Y287 266 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 PADI2Q9Y2J8 665 aa12.77□□□□□ -0.36
PDZRN3-208ENST00000479530 A0A1W2PQ09 198 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 ERVH48-1M5A8F1 160 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 CCRL2O00421 344 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 CKMT1AP12532 417 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 HOXD10P28358 340 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 SPIBQ01892 262 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 DDX39BQ13838 428 aaKnown RBP12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 RAB33AQ14088 237 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 POM121L1PQ3SYA9 428 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 ZNF852Q6ZMS4 543 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 ZNF438Q7Z4V0 828 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 VN1R5Q7Z5H4 357 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 RAB43Q86YS6 212 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 DOHHQ9BU89 302 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 PRRG3Q9BZD7 231 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 IMPAD1Q9NX62 359 aa12.77□□□□□ -0.37
PDZRN3-208ENST00000479530 A0A0B4J293 547 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 FAM227AF5H4B4 570 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 PCDH17O14917 1159 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 ALX3O95076 343 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 OLFM2O95897 454 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 FHP07954 510 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 C1SP09871 688 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 IL7P13232 177 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 PRPS1L1P21108 318 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 PXNP49023 591 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 DAB2P98082 770 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 CHRNEQ04844 493 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 VEZF1Q14119 521 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 COX20Q5RI15 118 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 SLC39A11Q8N1S5 342 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 CADM2Q8N3J6 435 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 LILRA3Q8N6C8 439 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 WDR36Q8NI36 951 aaKnown RBP12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 COQ8BQ96D53 544 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 RNF31Q96EP0 1072 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 OPALINQ96PE5 141 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 DEFB118Q96PH6 123 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 ASPNQ9BXN1 380 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 RDH14Q9HBH5 336 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 HHATLQ9HCP6 504 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 CLEC2DQ9UHP7 191 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 PCDHB11Q9Y5F2 797 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 XIRP2A4UGR9 3374 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 ALPK3Q96L96 1907 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 AGAP14A8MT82 685 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 CD22P20273 847 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 AOAHP28039 575 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 PTGES3Q15185 160 aaKnown RBP12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 FRG2Q64ET8 278 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 ANGPTL8Q6UXH0 198 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 Q6ZVU0 165 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 NLRP8Q86W28 1048 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 TMEM25Q86YD3 366 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 SORCS1Q8WY21 1168 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 TMCO6Q96DC7 493 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 SCRN2Q96FV2 425 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 CAPNS2Q96L46 248 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 NECTIN4Q96NY8 510 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 FRG2BQ96QU4 278 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 TAPBPLQ9BX59 468 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 TRIM39Q9HCM9 518 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 SNTG1Q9NSN8 517 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 GPATCH2Q9NW75 528 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 ZDHHC3Q9NYG2 299 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 B4GALT6Q9UBX8 382 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 TRAPPC4Q9Y296 219 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 KLHL20Q9Y2M5 609 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 NINQ8N4C6 2090 aa12.76□□□□□ -0.37
PDZRN3-208ENST00000479530 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 UGT2B17O75795 530 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 IGSF6O95976 241 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CXCL10P02778 98 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CSF2P04141 144 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CYP2A7P20853 494 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 SERPINA4P29622 427 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 NSG1P42857 185 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 OLR1P78380 273 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 RGNQ15493 299 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 CCSMST1Q4G0I0 132 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 TPRG1Q6ZUI0 275 aa12.75□□□□□ -0.37
PDZRN3-208ENST00000479530 ZNF367Q7RTV3 350 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms