RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 SLC13A4Q9UKG4 626 aa0.33□□□□□ -2.36
CALD1-218ENST00000478075 CCPG1Q9ULG6 757 aa0.33□□□□□ -2.36
CALD1-218ENST00000478075 HBS1LQ9Y450 684 aaKnown RBP0.33□□□□□ -2.36
CALD1-218ENST00000478075 SORL1Q92673 2214 aa0.33□□□□□ -2.36
CALD1-218ENST00000478075 SNX3O60493 162 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 OR2C1O95371 312 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 DDX58O95786 925 aaKnown RBP0.32□□□□□ -2.36
CALD1-218ENST00000478075 PDGFBP01127 241 aaPredicted RBP0.32□□□□□ -2.36
CALD1-218ENST00000478075 IGHG3P01860 377 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 MPZP25189 248 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 HMGCLP35914 325 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 HERVK_113P61574 105 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 PRKG2Q13237 762 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 BRD3Q15059 726 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 PPP1R3AQ16821 1122 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 C6orf136Q5SQH8 315 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 TEX38Q6PEX7 206 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 KLHL35Q6PF15 583 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 ARIH2OSQ8N7S6 290 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 ZNRF1Q8ND25 227 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 ROBO4Q8WZ75 1007 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 TSACCQ96A04 125 aaPredicted RBP0.32□□□□□ -2.36
CALD1-218ENST00000478075 NSUN4Q96CB9 384 aaKnown RBP0.32□□□□□ -2.36
CALD1-218ENST00000478075 NXPE2Q96DL1 559 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 SPDL1Q96EA4 605 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 SLC35E1Q96K37 410 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 CMTM3Q96MX0 182 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 SEPHS2Q99611 448 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 SRSF8Q9BRL6 282 aaKnown RBP0.32□□□□□ -2.36
CALD1-218ENST00000478075 MMP27Q9H306 513 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 ZDHHC4Q9NPG8 344 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 STOX2Q9P2F5 926 aaPredicted RBP0.32□□□□□ -2.36
CALD1-218ENST00000478075 APOBEC3BQ9UH17 382 aaKnown RBP0.32□□□□□ -2.36
CALD1-218ENST00000478075 FBXO7Q9Y3I1 522 aa0.32□□□□□ -2.36
CALD1-218ENST00000478075 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.31□□□□□ -2.36
CALD1-218ENST00000478075 IGKV3D-11A0A0A0MRZ8 115 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 MCF2LO15068 1137 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 PRAMEF12O95522 483 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 RB1P06400 928 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 YES1P07947 543 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 CD59P13987 128 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 ZNF14P17017 642 aaPredicted RBP0.31□□□□□ -2.36
CALD1-218ENST00000478075 XBP1P17861 261 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 UGT1A6P19224 532 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 CD34P28906 385 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 TRAPPC10P48553 1259 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 CLDN15P56746 228 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 CUL3Q13618 768 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 CRYMQ14894 314 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 TBCEQ15813 527 aaPredicted RBP0.31□□□□□ -2.36
CALD1-218ENST00000478075 NHSL2Q5HYW2 709 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 TOR1AIP1Q5JTV8 583 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 MACC1Q6ZN28 852 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 ZFP2Q6ZN57 461 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 TBC1D10CQ8IV04 446 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 RASGEF1AQ8N9B8 481 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 XXYLT1Q8NBI6 393 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 ZUFSPQ96AP4 578 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 SLC39A13Q96H72 371 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 ACTL8Q9H568 366 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 OPA3Q9H6K4 179 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 NMUR1Q9HB89 426 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 EQTNQ9NQ60 294 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 GSN-AS1Q9NRJ2 163 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 IMPAD1Q9NX62 359 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 PLAGL1Q9UM63 463 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 RNF24Q9Y225 148 aa0.31□□□□□ -2.36
CALD1-218ENST00000478075 IGLV8-61A0A075B6I0 122 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 A0A1W2PPQ1 181 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 FSD2A1L4K1 749 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 MYO1GB0I1T2 1018 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 TOMM70O94826 608 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 GJB5O95377 273 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 ANGPTL1O95841 491 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 SLC35E2P0CK97 266 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 MAGP20916 626 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 SFTPDP35247 375 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 NT5C2P49902 561 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 SUCLG1P53597 346 aaKnown RBP0.3□□□□□ -2.36
CALD1-218ENST00000478075 CD47Q08722 323 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 ASAH1Q13510 395 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 HERPUD1Q15011 391 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 NPTX1Q15818 432 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 KYAT1Q16773 422 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 KRTAP13-2Q52LG2 175 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 TATDN1Q6P1N9 297 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 Q6ZS52 159 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 ABHD12BQ7Z5M8 362 aaPredicted RBP0.3□□□□□ -2.36
CALD1-218ENST00000478075 RYBPQ8N488 228 aaPredicted RBP0.3□□□□□ -2.36
CALD1-218ENST00000478075 SAMD3Q8N6K7 520 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 PDILTQ8N807 584 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 ZNF586Q9NXT0 402 aa0.3□□□□□ -2.36
CALD1-218ENST00000478075 LMO7DNF2Z398 122 aa0.29□□□□□ -2.36
CALD1-218ENST00000478075 ZNF286BP0CG31 522 aa0.29□□□□□ -2.36
CALD1-218ENST00000478075 HSPA1AP0DMV8 641 aaKnown RBP0.29□□□□□ -2.36
CALD1-218ENST00000478075 HSPA1BP0DMV9 641 aaKnown RBP0.29□□□□□ -2.36
CALD1-218ENST00000478075 ZP3P21754 424 aa0.29□□□□□ -2.36
CALD1-218ENST00000478075 ZNF131P52739 623 aa0.29□□□□□ -2.36
CALD1-218ENST00000478075 DIO3P55073 304 aa0.29□□□□□ -2.36
CALD1-218ENST00000478075 CDH8P55286 799 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms