RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 STAMBPO95630 424 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ALPPL2P10696 532 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 TCN1P20061 433 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-210ENST00000475329 HIST1H1TP22492 207 aaPredicted RBP13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ATP5A1P25705 553 aaKnown RBP13.07□□□□□ -0.32
TRAF4-210ENST00000475329 MC1RQ01726 317 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 TRAP1Q12931 704 aaKnown RBP13.07□□□□□ -0.32
TRAF4-210ENST00000475329 BNIP2Q12982 314 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 CCNIQ14094 377 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 HEPACAMQ14CZ8 416 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 HLA-BQ31612 363 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ZNF385BQ569K4 471 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 RABL3Q5HYI8 236 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ZCCHC8Q6NZY4 707 aaKnown RBP13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ZNF793Q6ZN11 406 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 KANSL1Q7Z3B3 1105 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ZCCHC7Q8N3Z6 543 aaKnown RBP13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ZBTB44Q8NCP5 570 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 VPS37AQ8NEZ2 397 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 TM4SF18Q96CE8 201 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 CCDC115Q96NT0 180 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ANKRD27Q96NW4 1050 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 FCRL4Q96PJ5 515 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 GBP5Q96PP8 586 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 TRAPPC9Q96Q05 1148 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 SH3GL1Q99961 368 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 INPP5KQ9BT40 448 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 DUSP23Q9BVJ7 150 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ROGDIQ9GZN7 287 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 RAB33BQ9H082 229 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 C1GALT1Q9NS00 363 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 VAPAQ9P0L0 249 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 LRIT1Q9P2V4 623 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 BTNL2Q9UIR0 455 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 NEUROG3Q9Y4Z2 214 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 ADAMTS20P59510 1910 aa13.07□□□□□ -0.32
TRAF4-210ENST00000475329 NUP214P35658 2090 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 TRBV5-3A0A0A0MS03 114 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 PRSS51A0A1B0GVH4 220 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 TLCD2A6NGC4 264 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 H0YGG7 62 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 RNASET2O00584 256 aaKnown RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 P2RX6O15547 441 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 TBX19O60806 448 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 SCN2BO60939 215 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 BCAS2O75934 225 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 SCELO95171 688 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 PSMG1O95456 288 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 B3GALT4O96024 378 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 ZNF888P0CJ79 500 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 GIMD1P0DJR0 217 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 ST6GAL1P15907 406 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 GLB1P16278 677 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 HOXB9P17482 250 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 DDCP20711 480 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 AVPR2P30518 371 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 MSX2P35548 267 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 GPR3P46089 330 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 GSK3BP49841 420 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 MTPNP58546 118 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 ARF3P61204 181 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 LIPEQ05469 1076 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 TRIM25Q14258 630 aaKnown RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 SLC9A5Q14940 896 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 NR1D2Q14995 579 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 ANGPT1Q15389 498 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 CCDC6Q16204 474 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 RUNDC3AQ59EK9 446 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 MSRB3Q8IXL7 192 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 FAM156AQ8NDB6 213 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 OR8K5Q8NH50 307 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 ZNF764Q96H86 408 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 AHCYL2Q96HN2 611 aaKnown RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 PANX1Q96RD7 426 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 CD180Q99467 661 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 KCTD14Q9BQ13 255 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 CCDC3Q9BQI4 270 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 CPPED1Q9BRF8 314 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 FAIM2Q9BWQ8 316 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 NLNQ9BYT8 704 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 TRIM8Q9BZR9 551 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 MUC13Q9H3R2 512 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 ALG2Q9H553 416 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 DCLRE1BQ9H816 532 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 RNPEPL1Q9HAU8 725 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 IL21RQ9HBE5 538 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 CAPN10Q9HC96 672 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 PRDM7Q9NQW5 492 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 LYARQ9NX58 379 aaKnown RBP13.06□□□□□ -0.32
TRAF4-210ENST00000475329 SLC25A37Q9NYZ2 338 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 EPHA6Q9UF33 1036 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 BTBD3Q9Y2F9 522 aa13.06□□□□□ -0.32
TRAF4-210ENST00000475329 ARID1BQ8NFD5 2236 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-210ENST00000475329 LOC105369274A0A096LPK9 316 aa13.05□□□□□ -0.32
TRAF4-210ENST00000475329 LOC102723532A0A0G2JNH3 316 aa13.05□□□□□ -0.32
TRAF4-210ENST00000475329 SLC9B1P1A6NJY1 282 aa13.05□□□□□ -0.32
TRAF4-210ENST00000475329 ACOT8O14734 319 aa13.05□□□□□ -0.32
TRAF4-210ENST00000475329 NVLO15381 856 aaKnown RBP13.05□□□□□ -0.32
TRAF4-210ENST00000475329 ZSCAN9O15535 394 aaPredicted RBP13.05□□□□□ -0.32
TRAF4-210ENST00000475329 DUX1O43812 170 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms