RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-215	ENST00000475319	GPAA1	O43292	621 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	SEC14L5	O43304	696 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TSPAN2	O60636	221 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	MITF	O75030	526 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	BANF1	O75531	89 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	GABARAP	O95166	117 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	DIRAS3	O95661	229 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TTC4	O95801	387 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ANGPTL1	O95841	491 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	FTH1	P02794	183 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	GJB1	P08034	283 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ADORA3	P0DMS8	318 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	GLI4	P10075	376 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	UMPS	P11172	480 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	RALB	P11234	206 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ODC1	P11926	461 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NR2C1	P13056	603 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	HLA-E	P13747	358 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	CREB1	P16220	341 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	HLA-DPA1	P20036	260 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	PAICS	P22234	425 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	PPP2R1B	P30154	601 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	SPR	P35270	261 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	CHRNA7	P36544	502 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	CEACAM6	P40199	344 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	RFC3	P40938	356 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	DPP6	P42658	865 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	KIR2DL1	P43626	348 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	KIR2DL2	P43627	348 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	CLCNKA	P51800	687 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NR0B1	P51843	470 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	MAZ	P56270	477 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ARL4C	P56559	192 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NUTF2	P61970	127 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	VAMP2	P63027	116 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	PRKCD	Q05655	676 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	PPP3CA	Q08209	521 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NOG	Q13253	232 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	SNTB1	Q13884	538 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	KCNA10	Q16322	511 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ZNF827	Q17R98	1081 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	CCDC142	Q17RM4	750 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	HKDC1	Q2TB90	917 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TWISTNB	Q3B726	338 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	CHRFAM7A	Q494W8	412 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	GXYLT1	Q4G148	440 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	EPHA10	Q5JZY3	1008 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ARHGAP40	Q5TG30	622 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ZCCHC12	Q6PEW1	402 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	GAREM2	Q75VX8	874 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	LRRC8D	Q7L1W4	858 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TMEM199	Q8N511	208 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NANOGP1	Q8N7R0	232 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ZNF248	Q8NDW4	579 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NUP43	Q8NFH3	380 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	DMBX1	Q8NFW5	382 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	OR52N2	Q8NGI0	321 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	OR2T34	Q8NGX1	318 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	OR2T3	Q8NH03	318 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	IL31RA	Q8NI17	732 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NETO1	Q8TDF5	533 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NSUN6	Q8TEA1	469 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TFAP2C	Q92754	450 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	MYLPF	Q96A32	169 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	S100PBP	Q96BU1	408 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NXNL1	Q96CM4	212 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	BSCL2	Q96G97	398 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	C14orf144	Q96I85	54 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	SIGLEC10	Q96LC7	697 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	KLHL5	Q96PQ7	755 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	OR52B2	Q96RD2	323 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	PPP1R16B	Q96T49	567 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	PTPN18	Q99952	460 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TREX2	Q9BQ50	279 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TRIM51	Q9BSJ1	452 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ACTR6	Q9GZN1	396 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NAA50	Q9GZZ1	169 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	RNF32	Q9H0A6	362 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	CDC42EP4	Q9H3Q1	356 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ELOVL6	Q9H5J4	265 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	GREM2	Q9H772	168 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	WDR26	Q9H7D7	661 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	MANSC1	Q9H8J5	431 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	GKN1	Q9NS71	199 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	AGPAT5	Q9NUQ2	364 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	RDH8	Q9NYR8	311 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TAS2R3	Q9NYW6	316 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	SHOC2	Q9UQ13	582 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	ERVW-1	Q9UQF0	538 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NAALADL1	Q9UQQ1	740 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	CA5B	Q9Y2D0	317 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	PCDHA10	Q9Y5I2	948 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	TAF6L	Q9Y6J9	622 aa		5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	FAM208A	Q9UK61	1670 aa	Known RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	N4BP2	Q86UW6	1770 aa	Predicted RBP	5.76	□□□□□ -1.49
ECHDC1-215	ENST00000475319	SRCAP	Q6ZRS2	3230 aa		5.75	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NFAT5	O94916	1531 aa		5.75	□□□□□ -1.49
ECHDC1-215	ENST00000475319	RPS10-NUDT3	A0A1W2PQS6	291 aa		5.75	□□□□□ -1.49
ECHDC1-215	ENST00000475319		A0A1W2PRB8	838 aa		5.75	□□□□□ -1.49
ECHDC1-215	ENST00000475319	NPIPB8	E9PQR5	432 aa		5.75	□□□□□ -1.49

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