RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 SEC16BQ96JE7 1060 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 PTCHD1Q96NR3 888 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 ATOH8Q96SQ7 321 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 CD244Q9BZW8 370 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 PITHD1Q9GZP4 211 aaPredicted RBP12.81□□□□□ -0.36
SPCS1-204ENST00000474945 REXO4Q9GZR2 422 aaKnown RBP12.81□□□□□ -0.36
SPCS1-204ENST00000474945 AICDAQ9GZX7 198 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 TSPYL1Q9H0U9 437 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 ABI3Q9P2A4 366 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 OPTCQ9UBM4 332 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 PTBP2Q9UKA9 531 aaKnown RBP12.81□□□□□ -0.36
SPCS1-204ENST00000474945 IKBKGQ9Y6K9 419 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 DOPEY2Q9Y3R5 2298 aa12.81□□□□□ -0.36
SPCS1-204ENST00000474945 COL12A1Q99715 3063 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 PRRC2CQ9Y520 2896 aaKnown RBP12.8□□□□□ -0.36
SPCS1-204ENST00000474945 A0A096LPK6 155 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 BLACEA4D250 179 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 OR5H15A6NDH6 313 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 B3GALT2O43825 422 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 PRMT3O60678 531 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 C2P06681 752 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 PCNAP12004 261 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 GFAPP14136 432 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 CD22P20273 847 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 CERS1P27544 350 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 MSH2P43246 934 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 TAS2R50P59544 299 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 TGM3Q08188 693 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 LAPTM5Q13571 262 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 HIST2H2ACQ16777 129 aaPredicted RBP12.8□□□□□ -0.36
SPCS1-204ENST00000474945 EIF2S3LQ2VIR3 472 aaKnown RBP12.8□□□□□ -0.36
SPCS1-204ENST00000474945 HIST2H2AA3Q6FI13 130 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 VN1R5Q7Z5H4 357 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 MYLK4Q86YV6 388 aaPredicted RBP12.8□□□□□ -0.36
SPCS1-204ENST00000474945 BEST3Q8N1M1 668 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 SLC5A8Q8N695 610 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 FAM47BQ8NA70 645 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 PLPP5Q8NEB5 264 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 KIF18AQ8NI77 898 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 SUN3Q8TAQ9 357 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 MS4A6EQ96DS6 147 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 TRIM44Q96DX7 344 aaPredicted RBP12.8□□□□□ -0.36
SPCS1-204ENST00000474945 RNF32Q9H0A6 362 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 VPS11Q9H270 941 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 NT5DC2Q9H857 520 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 CLK4Q9HAZ1 481 aaKnown RBP12.8□□□□□ -0.36
SPCS1-204ENST00000474945 MMP25Q9NPA2 562 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 PRDM9Q9NQV7 894 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 COPG2Q9UBF2 871 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 ANGPTL3Q9Y5C1 460 aa12.8□□□□□ -0.36
SPCS1-204ENST00000474945 USP9XQ93008 2570 aaPredicted RBP12.79□□□□□ -0.36
SPCS1-204ENST00000474945 HMX2A2RU54 273 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 LRIT2A6NDA9 550 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 FAM227AF5H4B4 570 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 K7EPI3 171 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 PRAMEF4O60810 478 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 ALDOAP04075 364 aaKnown RBP12.79□□□□□ -0.36
SPCS1-204ENST00000474945 TUBB4AP04350 444 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 SMIM10L1P0DMW3 83 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 EPORP19235 508 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 TYK2P29597 1187 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 ECHS1P30084 290 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 KCNC1P48547 511 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 RAB38P57729 211 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 SLC26A5P58743 744 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 BTG2P78543 158 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 INAQ16352 499 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 GLE1Q53GS7 698 aaKnown RBP12.79□□□□□ -0.36
SPCS1-204ENST00000474945 PRAMEF9Q5VWM5 478 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 CRLF3Q8IUI8 442 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 RELL1Q8IUW5 271 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 BCORP1Q8N888 145 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 OR2L5Q8NG80 312 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 M1APQ8TC57 530 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 ADAMTS18Q8TE60 1221 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 UBE2E3Q969T4 207 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 WDR34Q96EX3 536 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 SMIM10Q96HG1 83 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 ZNF354BQ96LW1 612 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 PAFAH2Q99487 392 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 OLAHQ9NV23 265 aa12.79□□□□□ -0.36
SPCS1-204ENST00000474945 CPSF2Q9P2I0 782 aaKnown RBP12.79□□□□□ -0.36
SPCS1-204ENST00000474945 CPAMD8Q8IZJ3 1885 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 SAGE2PA6NJ88 616 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 A8MUA0 341 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 E2F3O00716 465 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 PRAMEF2O60811 474 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 SEMA7AO75326 666 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 SH3BGRLO75368 114 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 CBX6O95503 412 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 EPB42P16452 691 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 MTTPP55157 894 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 DDX39BQ13838 428 aaKnown RBP12.78□□□□□ -0.36
SPCS1-204ENST00000474945 SETDB1Q15047 1291 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 TBCCQ15814 346 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 MEP1AQ16819 746 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 PFKFB4Q16877 469 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 ACER2Q5QJU3 275 aa12.78□□□□□ -0.36
SPCS1-204ENST00000474945 MED27Q6P2C8 311 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms