RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 TCRBV16S1A1N1A0A5B0 115 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PINLYPA6NC86 204 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 OR14I1A6ND48 311 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 A6NNC1 897 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 E5RI56 91 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 BCKDKO14874 412 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 NDUFS4O43181 175 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 CHST10O43529 356 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 ZBTB14O43829 449 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 GALR3O60755 368 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 B4GALT2O60909 372 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 ITGA10O75578 1167 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 MYO1DO94832 1006 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 GLSO94925 669 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 ATE1O95260 518 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 B3GALT4O96024 378 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 IGHG3P01860 377 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 TUBB4AP04350 444 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 FBXO45P0C2W1 286 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 CDH1P12830 882 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 ALOX12P18054 663 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 OGNP20774 298 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 MAOAP21397 527 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 ADSLP30566 484 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 HOXC12P31275 282 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PEX19P40855 299 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 KIR2DL3P43628 341 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 ZFP36L2P47974 494 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 DGKQP52824 942 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 NAP1L1P55209 391 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 OLR1P78380 273 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 BTG2P78543 158 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 MEF2AQ02078 507 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SNTB1Q13884 538 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC25A35Q3KQZ1 300 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 TTLL9Q3SXZ7 439 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 DEFB134Q4QY38 66 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 FLYWCH1Q4VC44 716 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PAOXQ6QHF9 649 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 CES3Q6UWW8 571 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 B3GNT6Q6ZMB0 384 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 MBOAT1Q6ZNC8 495 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 KIAA0408Q6ZU52 694 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 UBE2R2Q712K3 238 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 CENPUQ71F23 418 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PIWIL4Q7Z3Z4 852 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SDCCAG8Q86SQ7 713 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 C17orf64Q86WR6 236 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PRIMA1Q86XR5 153 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 KRTAP1-3Q8IUG1 177 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 CILP2Q8IUL8 1156 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 TMEM156Q8N614 296 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PRELID2Q8N945 189 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 MFSD9Q8NBP5 474 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 LRRN4CLQ8ND94 238 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PSD4Q8NDX1 1056 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 B3GNT7Q8NFL0 401 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 OR2M7Q8NG81 312 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 OR10Q1Q8NGQ4 319 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 NUDT8Q8WV74 236 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 KCNJ9Q92806 393 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SLCO2A1Q92959 643 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 ARSGQ96EG1 525 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PTCHD1Q96NR3 888 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SMC6Q96SB8 1091 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SECISBP2Q96T21 854 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 MDFIQ99750 246 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SARGQ9BW04 601 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 KIFC1Q9BW19 673 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SGPP1Q9BX95 441 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 DEFB126Q9BYW3 111 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 TTTY12Q9BZ98 90 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 FAM129AQ9BZQ8 928 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 LACRTQ9GZZ8 138 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PCBD2Q9H0N5 130 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 TIMMDC1Q9NPL8 285 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 DMRT3Q9NQL9 472 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 EIF2B3Q9NR50 452 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SYBUQ9NX95 663 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 KCMF1Q9P0J7 381 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PAK5Q9P286 719 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 KLHL42Q9P2K6 505 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF223Q9UK11 482 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 AMFRQ9UKV5 643 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 CBLCQ9ULV8 474 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 PACSIN2Q9UNF0 486 aaPredicted RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 REXO2Q9Y3B8 237 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 LIPGQ9Y5X9 500 aa4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 SONP18583 2426 aaKnown RBP4.77□□□□□ -1.65
SNRNP40-204ENST00000474025 A0A1B0GVC2 190 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 CTAGE15A4D2H0 777 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 FAM166BA8MTA8 275 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 A8MUA0 341 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 KIAA1324LA8MWY0 1029 aaPredicted RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 MIF4GDA9UHW6 222 aaKnown RBP4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 ACOT7O00154 380 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 AQP7O14520 342 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 PFDN6O15212 129 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC16A5O15375 505 aa4.76□□□□□ -1.65
SNRNP40-204ENST00000474025 PRKNO60260 465 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms