RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 SEC22BO75396 215 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 IDO1P14902 403 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ACPPP15309 386 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 FOLR1P15328 257 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 PTX3P26022 381 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-205ENST00000473879 BCL6P41182 706 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ARL4DP49703 201 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 RPL38P63173 70 aaKnown RBP12.63□□□□□ -0.39
BRAT1-205ENST00000473879 EMX2Q04743 252 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ABHD18Q0P651 414 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ZSCAN26Q16670 478 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 SPIN4Q56A73 249 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 C6orf89Q6UWU4 347 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 TIPARPQ7Z3E1 657 aaKnown RBP12.63□□□□□ -0.39
BRAT1-205ENST00000473879 PPP1R3BQ86XI6 285 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 FAM9CQ8IZT9 166 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 FITM2Q8N6M3 262 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ANKRD53Q8N9V6 530 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ZSCAN1Q8NBB4 408 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 MFSD9Q8NBP5 474 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ZFYVE21Q9BQ24 234 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 SAR1AQ9NR31 198 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 ASIC5Q9NY37 505 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 RARRES3Q9UL19 164 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 EIF3LQ9Y262 564 aaKnown RBP12.63□□□□□ -0.39
BRAT1-205ENST00000473879 PCDHGA4Q9Y5G9 962 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 AP1M2Q9Y6Q5 423 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 BAHCC1Q9P281 2608 aa12.63□□□□□ -0.39
BRAT1-205ENST00000473879 MGAQ8IWI9 3026 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 H3BMH7 237 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 MYO1DO94832 1006 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 SEMA3DO95025 777 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 LIFP15018 202 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 ZNF28P17035 718 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 WT1P19544 449 aaPredicted RBP12.62□□□□□ -0.39
BRAT1-205ENST00000473879 GABRA4P48169 554 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 CYP4F2P78329 520 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 RGS1Q08116 209 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 ACSM2AQ08AH3 577 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 CUL3Q13618 768 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 KCNAB1Q14722 419 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 RPS6KA2Q15349 733 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 TMTC4Q5T4D3 741 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 TMEM198Q66K66 360 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 ACSM2BQ68CK6 577 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 FCRL6Q6DN72 434 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 ADNP2Q6IQ32 1131 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 CCDC121Q6ZUS5 278 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 RNF44Q7L0R7 432 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 PLD3Q8IV08 490 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 CPSF7Q8N684 471 aaKnown RBP12.62□□□□□ -0.39
BRAT1-205ENST00000473879 ESX1Q8N693 406 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 ZNF655Q8N720 491 aaPredicted RBP12.62□□□□□ -0.39
BRAT1-205ENST00000473879 C19orf47Q8N9M1 422 aaKnown RBP12.62□□□□□ -0.39
BRAT1-205ENST00000473879 TTC9Q92623 222 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 RERGQ96A58 199 aaPredicted RBP12.62□□□□□ -0.39
BRAT1-205ENST00000473879 PPM1MQ96MI6 270 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 EFHD1Q9BUP0 239 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 MS4A8Q9BY19 250 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 ULBP3Q9BZM4 244 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 ZNF385DQ9H6B1 395 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 FGF21Q9NSA1 209 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 AIG1Q9NVV5 245 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 AHSPQ9NZD4 102 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 GIMAP2Q9UG22 337 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 G3BP2Q9UN86 482 aaKnown RBP12.62□□□□□ -0.39
BRAT1-205ENST00000473879 RUVBL1Q9Y265 456 aaKnown RBP12.62□□□□□ -0.39
BRAT1-205ENST00000473879 KLHL20Q9Y2M5 609 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 POLR3HQ9Y535 204 aaPredicted RBP12.62□□□□□ -0.39
BRAT1-205ENST00000473879 CAPN7Q9Y6W3 813 aa12.62□□□□□ -0.39
BRAT1-205ENST00000473879 HEATR5BQ9P2D3 2071 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 SLC9B1P1A6NJY1 282 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 NDUFS4O43181 175 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 LCMT2O60294 686 aaKnown RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 KIAA0754O94854 1291 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 TGFB1P01137 390 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 SERPIND1P05546 499 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 ALDOCP09972 364 aaKnown RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 SLC35G6P0C7Q6 338 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 PRPS2P11908 318 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 PVRP15151 417 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 ST6GAL1P15907 406 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 STAT5AP42229 794 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 MRPL19P49406 292 aaKnown RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 RAP1GDS1P52306 607 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 STXBP1P61764 594 aaKnown RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 PWP1Q13610 501 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 UBAP2LQ14157 1087 aaKnown RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 MAPRE2Q15555 327 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 RFTN2Q52LD8 501 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 TMEM35AQ53FP2 167 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 ZC3H12BQ5HYM0 836 aaKnown RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 KHDRBS2Q5VWX1 349 aaKnown RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 PCSK4Q6UW60 755 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 C6orf15Q6UXA7 325 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-205ENST00000473879 VN1R5Q7Z5H4 357 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 ASPGQ86U10 573 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 MIER2Q8N344 545 aa12.61□□□□□ -0.39
BRAT1-205ENST00000473879 RNF175Q8N4F7 328 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms