RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SYNPOQ8N3V7 929 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 KLHDC9Q8NEP7 349 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 TESCQ96BS2 214 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 ZBED6CLQ96FA7 236 aaPredicted RBP13.21□□□□□ -0.29
NPHP4-207ENST00000470763 FAM129BQ96TA1 746 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 DOHHQ9BU89 302 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.29
NPHP4-207ENST00000470763 PPIL3Q9H2H8 161 aaKnown RBP13.21□□□□□ -0.29
NPHP4-207ENST00000470763 B3GNT2Q9NY97 397 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 EIF3KQ9UBQ5 218 aaKnown RBP13.21□□□□□ -0.29
NPHP4-207ENST00000470763 STUB1Q9UNE7 303 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 PLXNA4Q9HCM2 1894 aa13.21□□□□□ -0.29
NPHP4-207ENST00000470763 SMIM35A0A1B0GVV1 85 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 HBQ1P09105 142 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 COX7A2P14406 83 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 PXNP49023 591 aaPredicted RBP13.21□□□□□ -0.3
NPHP4-207ENST00000470763 PRKCZQ05513 592 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.21□□□□□ -0.3
NPHP4-207ENST00000470763 MRPL28Q13084 256 aaKnown RBP13.21□□□□□ -0.3
NPHP4-207ENST00000470763 CCDC85BQ15834 202 aaPredicted RBP13.21□□□□□ -0.3
NPHP4-207ENST00000470763 UGT8Q16880 541 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 MICAQ29983 383 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 ZBTB37Q5TC79 503 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 TRIQKQ629K1 86 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 METTL23Q86XA0 190 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 GDPD1Q8N9F7 314 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 C19orf18Q8NEA5 215 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 SH3KBP1Q96B97 665 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 CINPQ9BW66 212 aaPredicted RBP13.21□□□□□ -0.3
NPHP4-207ENST00000470763 P2RY12Q9H244 342 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 CLN6Q9NWW5 311 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 SSR3Q9UNL2 185 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 MAPRE3Q9UPY8 281 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 PADI2Q9Y2J8 665 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 YARS2Q9Y2Z4 477 aaKnown RBP13.21□□□□□ -0.3
NPHP4-207ENST00000470763 OARD1Q9Y530 152 aa13.21□□□□□ -0.3
NPHP4-207ENST00000470763 FADS2P1A8MWK0 482 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 POMCP01189 267 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SLC2A2P11168 524 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PRPS2P11908 318 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 CHMP24386 653 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SOX9P48436 509 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 MAB21L1Q13394 359 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SYT12Q8IV01 421 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 FAM181AQ8N9Y4 354 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SYT14Q8NB59 555 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SLC25A46Q96AG3 418 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 NTMT1Q9BV86 223 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SPATA9Q9BWV2 254 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 COMMD3Q9UBI1 195 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SEC14L4Q9UDX3 406 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PLEKHB1Q9UF11 243 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 GREB1Q4ZG55 1949 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 MYL12BO14950 172 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PCDH7O60245 1069 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 GCM2O75603 506 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SLC25A14O95258 325 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 MSL3P1P0C860 447 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 NAGAP17050 411 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 CTRB1P17538 263 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 MYL12AP19105 171 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 TNNI3P19429 210 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 WNT3P56703 355 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 RRAS2P62070 204 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 P2RY14Q15391 338 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 DDI2Q5TDH0 399 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 CTRB2Q6GPI1 263 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 Q8N402 240 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PIH1D2Q8WWB5 315 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 MTERF3Q96E29 417 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 QRFPRQ96P65 431 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 TMEM245Q9H330 911 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PDFQ9HBH1 243 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 LSM2Q9Y333 95 aaKnown RBP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PRSS21Q9Y6M0 314 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 IGLV3-10A0A075B6K4 115 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 TEX51A0A1B0GUA7 166 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 HYKKA2RU49 373 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PRAMEF25A6NGN4 478 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 ARL5CA6NH57 179 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 STK16O75716 305 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PRAMEF12O95522 483 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 ARSBP15848 533 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 EPORP19235 508 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 SDC2P34741 201 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 CDC42EP1Q00587 391 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 MGAT3Q09327 533 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 FAM151BQ6UXP7 276 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
NPHP4-207ENST00000470763 NAGSQ8N159 534 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 C9orf62Q8N4C0 152 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 OR4C15Q8NGM1 316 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PHF21AQ96BD5 680 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 PKMYT1Q99640 499 aa13.2□□□□□ -0.3
NPHP4-207ENST00000470763 TCF25Q9BQ70 676 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms