RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 TNFSF12O43508 249 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 MTRF1O75570 445 aaKnown RBP4.34□□□□□ -1.71
SSB-209ENST00000470621 CALCAP01258 141 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 FOLR2P14207 255 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 PKLRP30613 574 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 KRTAP10-3P60369 221 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 ERVK-16P61578 105 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 RPP38P78345 283 aaKnown RBP4.34□□□□□ -1.71
SSB-209ENST00000470621 RBP5P82980 135 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 SCN1BQ07699 218 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 FCHO2Q0JRZ9 810 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 CNTN1Q12860 1018 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 ITPK1Q13572 414 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 PTK6Q13882 451 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 PPA1Q15181 289 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 SPOUT1Q5T280 376 aaKnown RBP4.34□□□□□ -1.71
SSB-209ENST00000470621 SLC27A4Q6P1M0 643 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 PODNL1Q6PEZ8 512 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 GALNTL5Q7Z4T8 443 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 CARM1Q86X55 608 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 NHLRC2Q8NBF2 726 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 SMPDL3AQ92484 453 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 FAM162AQ96A26 154 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 ATF6BQ99941 703 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 ATG101Q9BSB4 218 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 PUS3Q9BZE2 481 aaKnown RBP4.34□□□□□ -1.71
SSB-209ENST00000470621 LSG1Q9H089 658 aaKnown RBP4.34□□□□□ -1.71
SSB-209ENST00000470621 ADNPQ9H2P0 1102 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 GPR132Q9UNW8 380 aa4.34□□□□□ -1.71
SSB-209ENST00000470621 GON4LQ3T8J9 2241 aa4.34□□□□□ -1.72
SSB-209ENST00000470621 ABCA7Q8IZY2 2146 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 NME6O75414 186 aaPredicted RBP4.33□□□□□ -1.72
SSB-209ENST00000470621 SRSF10O75494 262 aaKnown RBP4.33□□□□□ -1.72
SSB-209ENST00000470621 SUPT20HL2P0C7V6 817 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 BCL3P20749 454 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 NPBWR1P48145 328 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 LIMK2P53671 638 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 BACE1P56817 501 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 ABRQ12979 859 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 KNOP1Q1ED39 458 aaKnown RBP4.33□□□□□ -1.72
SSB-209ENST00000470621 TWISTNBQ3B726 338 aaPredicted RBP4.33□□□□□ -1.72
SSB-209ENST00000470621 ARMCX4Q5H9R4 360 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 PM20D1Q6GTS8 502 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 TCEAL6Q6IPX3 200 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 PHLDB2Q86SQ0 1253 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 SLC25A42Q86VD7 318 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 ANKRD46Q86W74 232 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 OR4N5Q8IXE1 308 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 KLHL7Q8IXQ5 586 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 BPIFA2Q96DR5 249 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 CITED2Q99967 270 aaPredicted RBP4.33□□□□□ -1.72
SSB-209ENST00000470621 NACAP1Q9BZK3 213 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 PDRG1Q9NUG6 133 aa4.33□□□□□ -1.72
SSB-209ENST00000470621 ILVBLA1L0T0 632 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 KBTBD13C9JR72 458 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 H0YIG0 161 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 K7EQG2 157 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 SLC30A4O14863 429 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 IFIT3O14879 490 aaKnown RBP4.32□□□□□ -1.72
SSB-209ENST00000470621 WDR46O15213 610 aaKnown RBP4.32□□□□□ -1.72
SSB-209ENST00000470621 ANGPTL1O95841 491 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 ADORA3P0DMS8 318 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 GLULP15104 373 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 CD1DP15813 335 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 CCND3P30281 292 aaPredicted RBP4.32□□□□□ -1.72
SSB-209ENST00000470621 KHKP50053 298 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 FKBP1BP68106 108 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 GCKRQ14397 625 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 SIX1Q15475 284 aaPredicted RBP4.32□□□□□ -1.72
SSB-209ENST00000470621 IQCCQ4KMZ1 466 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 CASC4Q6P4E1 433 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 MCM10Q7L590 875 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 RNF130Q86XS8 419 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 PHC2Q8IXK0 858 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 SPAG16Q8N0X2 631 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 SLC35C1Q96A29 364 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 RFT1Q96AA3 541 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 MRPL17Q9NRX2 175 aaKnown RBP4.32□□□□□ -1.72
SSB-209ENST00000470621 GTSE1Q9NYZ3 720 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 TMED7Q9Y3B3 224 aa4.32□□□□□ -1.72
SSB-209ENST00000470621 AGRNO00468 2067 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 CCDC162PA2VCL2 907 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 SRRM4A7MD48 611 aaKnown RBP4.31□□□□□ -1.72
SSB-209ENST00000470621 PHF1O43189 567 aaPredicted RBP4.31□□□□□ -1.72
SSB-209ENST00000470621 B4GAT1O43505 415 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 SCO2O43819 266 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 CASTP20810 708 aaKnown RBP4.31□□□□□ -1.72
SSB-209ENST00000470621 GJB2P29033 226 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 SLC1A3P43003 542 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 CETN1Q12798 172 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 SIGLEC15Q6ZMC9 328 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 ERC1Q8IUD2 1116 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 AQP12AQ8IXF9 295 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 SLC43A2Q8N370 569 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 SPEM1Q8N4L4 309 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 NABP1Q96AH0 204 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 CCDC114Q96M63 670 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 TAAR6Q96RI8 345 aa4.31□□□□□ -1.72
SSB-209ENST00000470621 PARK7Q99497 189 aaKnown RBP4.31□□□□□ -1.72
SSB-209ENST00000470621 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms