RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 ARL14Q8N4G2 192 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CPSF7Q8N684 471 aaKnown RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 DCBLD1Q8N8Z6 715 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 LINC01555Q8NAE3 123 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 GPR156Q8NFN8 814 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 OR2L3Q8NG85 312 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 OR7G3Q8NG95 312 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 STARD8Q92502 1023 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 NAT6Q93015 286 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ZUFSPQ96AP4 578 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ERP27Q96DN0 273 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CMTM5Q96DZ9 223 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CMTM7Q96FZ5 175 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 RHOVQ96L33 236 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 OR52B2Q96RD2 323 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 KCNA7Q96RP8 456 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CD180Q99467 661 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 SERPINI1Q99574 410 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 SLC38A3Q99624 504 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 EBF4Q9BQW3 602 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 SARGQ9BW04 601 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ACAT2Q9BWD1 397 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 TWSG1Q9GZX9 223 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 RAB33BQ9H082 229 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 MYLK2Q9H1R3 596 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 RHBGQ9H310 441 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 TUBB1Q9H4B7 451 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 XKR8Q9H6D3 395 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 WDR55Q9H6Y2 383 aaPredicted RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CAPN10Q9HC96 672 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 TNFRSF12AQ9NP84 129 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 FSCN3Q9NQT6 498 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ABCF3Q9NUQ8 709 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 GEMIN8Q9NWZ8 242 aaKnown RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 C1orf109Q9NX04 203 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ASIC5Q9NY37 505 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 ACTR10Q9NZ32 417 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 AHSPQ9NZD4 102 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 VPS29Q9UBQ0 182 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 CIDEBQ9UHD4 219 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 EIF3LQ9Y262 564 aaKnown RBP6.35□□□□□ -1.39
VAMP3-202ENST00000470357 BTRCQ9Y297 605 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 KLK4Q9Y5K2 254 aa6.35□□□□□ -1.39
VAMP3-202ENST00000470357 URB1O60287 2271 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 UNC13CQ8NB66 2214 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 TRBV23OR9-2A0A075B6M9 112 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 A0A0J9YY10 115 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 A0A1B0GTL3 188 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ATP6AP2A0A1C7CYW4 349 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 DYTNA2CJ06 578 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 GSAPA4D1B5 854 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 KRT87PA6NCN2 255 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 OR6C74A6NCV1 312 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 LSM1O15116 133 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 TNFSF14O43557 240 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 NOBOXO60393 691 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 CLEC3AO75596 197 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ATP6AP2O75787 350 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 UBXN7O94888 489 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 SLITRK5O94991 958 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 SEMA3DO95025 777 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 PDYNP01213 254 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 JUNP05412 331 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 THRAP10827 490 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 PRPS2P11908 318 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 PCNAP12004 261 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 PNLIPP16233 465 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 AMD1P17707 334 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 DDX5P17844 614 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 CALB2P22676 271 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 AHRP35869 848 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ACADVLP49748 655 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 DUSP3P51452 185 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ATXN3P54252 364 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 GP2P55259 537 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 RPS15AP62244 130 aaKnown RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 TGM3Q08188 693 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ACSM2AQ08AH3 577 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 CUL3Q13618 768 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ABRAXAS2Q15018 415 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 HERC3Q15034 1050 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 TCEA2Q15560 299 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 CLPPQ16740 277 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 AP5B1Q2VPB7 878 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 TMEM35AQ53FP2 167 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 SPIN4Q56A73 249 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 SGO1Q5FBB7 561 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 C6orf136Q5SQH8 315 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 SNAP47Q5SQN1 464 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 CATSPEREQ5SY80 951 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 CACHD1Q5VU97 1274 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ACSM2BQ68CK6 577 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 SPESP1Q6UW49 350 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ADCK2Q7Z695 626 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 MIER2Q8N344 545 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 C2orf73Q8N5S3 287 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 FITM2Q8N6M3 262 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 ZNF655Q8N720 491 aaPredicted RBP6.34□□□□□ -1.39
VAMP3-202ENST00000470357 FNDC5Q8NAU1 212 aa6.34□□□□□ -1.39
VAMP3-202ENST00000470357 GOLM1Q8NBJ4 401 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms