RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 CIDEBQ9UHD4 219 aa3.35□□□□□ -1.87
TRIM59-202ENST00000468542 TRPS1Q9UHF7 1281 aa3.35□□□□□ -1.87
TRIM59-202ENST00000468542 EMCNQ9ULC0 261 aa3.35□□□□□ -1.87
TRIM59-202ENST00000468542 SNX6Q9UNH7 406 aa3.35□□□□□ -1.87
TRIM59-202ENST00000468542 ASB1Q9Y576 335 aa3.35□□□□□ -1.87
TRIM59-202ENST00000468542 ANGPTL3Q9Y5C1 460 aa3.35□□□□□ -1.87
TRIM59-202ENST00000468542 CPAMD8Q8IZJ3 1885 aa3.35□□□□□ -1.87
TRIM59-202ENST00000468542 SCN2AQ99250 2005 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 LOC105369274A0A096LPK9 316 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 LOC102723532A0A0G2JNH3 316 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 PMS2P1A4D2B8 440 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 LRIT2A6NDA9 550 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ANKDD1BA6NHY2 528 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SMIM23A6NLE4 172 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 VSTM2BA6NLU5 285 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ZNF891A8MT65 544 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 HMGB1P1B2RPK0 211 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TMEM114B3SHH9 223 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 GOLGA8RI6L899 631 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 K7ENP7 123 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 AGPSO00116 658 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TAF4O00268 1085 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 OR7A17O14581 309 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 KLF11O14901 512 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 NDUFS4O43181 175 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 HCRTR1O43613 425 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 FOXS1O43638 330 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TLX3O43711 291 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 OR1F1O43749 312 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 NPHS1O60500 1241 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 GALR3O60755 368 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 PRAMEF4O60810 478 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 KLF7O75840 302 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SUPT7LO94864 414 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SIX3O95343 332 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TIAF1O95411 115 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 KRT6AP02538 564 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 KRT6BP04259 564 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 CAPN1P07384 714 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 BPGMP07738 259 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 FGF4P08620 206 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SMIM10L1P0DMW3 83 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ACPPP15309 386 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ZNF28P17035 718 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ALOX12P18054 663 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 JAK1P23458 1154 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 MMP11P24347 488 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 PTX3P26022 381 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 PTPN4P29074 926 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 AVPR1BP47901 424 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SERPINB4P48594 390 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 KRT6CP48668 564 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 AGTR2P50052 363 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 CCNG1P51959 295 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 HK2P52789 917 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TMPRSS3P57727 454 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 VSX2P58304 361 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 RPS15P62841 145 aaKnown RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 YBX1P67809 324 aaKnown RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 MEF2AQ02078 507 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 CLCQ05315 142 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 HYAL2Q12891 473 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 CSTF3Q12996 717 aaKnown RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 DNASE1L3Q13609 305 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TSTA3Q13630 321 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SLBPQ14493 270 aaKnown RBP eCLIP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 PCLAFQ15004 111 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 NCF4Q15080 339 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 UNC50Q53HI1 259 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 CFAP157Q5JU67 520 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 DEPDC1Q5TB30 811 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 AGBL2Q5U5Z8 902 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 PRAMEF9Q5VWM5 478 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 KHDRBS2Q5VWX1 349 aaKnown RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 FRMPD2BQ6IN97 320 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 GALNT18Q6P9A2 607 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TRIM40Q6P9F5 258 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 INO80CQ6PI98 192 aaPredicted RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 FAM198BQ6UWH4 519 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 GPRIN3Q6ZVF9 776 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TTLL10Q6ZVT0 673 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 OVCH1Q7RTY7 1134 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TIPARPQ7Z3E1 657 aaKnown RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 EXOC3L1Q86VI1 746 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ZFAND4Q86XD8 727 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 MARCH9Q86YJ5 346 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SPACA3Q8IXA5 215 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 FAM20CQ8IXL6 584 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 OR4N4Q8N0Y3 316 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 C4orf33Q8N1A6 199 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ZCCHC7Q8N3Z6 543 aaKnown RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 IL22RA1Q8N6P7 574 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 TEX9Q8N6V9 391 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 AMER3Q8N944 861 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 SNX31Q8N9S9 440 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ANKRD53Q8N9V6 530 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 LSM14AQ8ND56 463 aaKnown RBP3.34□□□□□ -1.87
TRIM59-202ENST00000468542 ZNF740Q8NDX6 193 aa3.34□□□□□ -1.87
TRIM59-202ENST00000468542 OR2L5Q8NG80 312 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms