RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MEX3AA1L020 520 aaKnown RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 GLOD5A6NK44 160 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 EPM2AB3EWF7 344 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 PLOD3O60568 738 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 DNTTP04053 509 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 DANCRP0C864 163 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 CDH3P22223 829 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 DNASE1P24855 282 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 PTPN3P26045 913 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 MNDAP41218 407 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 MATR3P43243 847 aaKnown RBP eCLIP2.89□□□□□ -1.95
XRN1-206ENST00000467077 RPL21P46778 160 aaKnown RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 LEPRP48357 1165 aaKnown RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 CDH13P55290 713 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 BACE1P56817 501 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 PAX8Q06710 450 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 ZNF415Q09FC8 603 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 TAF10Q12962 218 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 BAATQ14032 418 aaPredicted RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 ODF4Q2M2E3 257 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 PDLIM3Q53GG5 364 aaPredicted RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 SYT14P1Q58G82 188 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 BEND3Q5T5X7 828 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 NAA16Q6N069 864 aaPredicted RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 Q6ZRP5 223 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 TMPRSS11BQ86T26 416 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 DZIP1Q86YF9 867 aaKnown RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 ZNF595Q8IYB9 648 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 AVL9Q8NBF6 648 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 C17orf47Q8NEP4 570 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 TRPV1Q8NER1 839 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 NAV1Q8NEY1 1877 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 PRSS33Q8NF86 280 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 OR10S1Q8NGN2 331 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 OR10G8Q8NGN5 311 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 ARHGAP45Q92619 1136 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 SPDL1Q96EA4 605 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 CNOT6LQ96LI5 555 aaKnown RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 GAL3ST4Q96RP7 486 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 APOL6Q9BWW8 343 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 IDI2Q9BXS1 227 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 DGCR6LQ9BY27 220 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 MRPL1Q9BYD6 325 aaKnown RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 SHARPINQ9H0F6 387 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 SLC35C2Q9NQQ7 365 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 GKN1Q9NS71 199 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 DPP3Q9NY33 737 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 CPSF2Q9P2I0 782 aaKnown RBP2.89□□□□□ -1.95
XRN1-206ENST00000467077 PPP1R3CQ9UQK1 317 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 ANGPTL3Q9Y5C1 460 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 hCG_1809904A0A1W2PP81 198 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 A0A1W2PPE2 198 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 A0A1W2PR64 198 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 SLC15A5A6NIM6 579 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 C2orf81A6NN90 581 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 C15orf61A6NNL5 157 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 ENO4A6NNW6 628 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 C19orf81C9J6K1 198 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 MEIS2O14770 477 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 HPRP00739 348 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 ZSCAN5DPP0CG00 497 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 SMIM18P0DKX4 95 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 JAK1P23458 1154 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 MMP12P39900 470 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 OPRL1P41146 370 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 BTDP43251 543 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 LMAN1P49257 510 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 PAX9P55771 341 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 CCNA1P78396 465 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 MAT1AQ00266 395 aaKnown RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 POU5F1Q01860 360 aaKnown RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 HERC3Q15034 1050 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 CA9Q16790 459 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 TMEM207Q6UWW9 146 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 BTN2A1Q7KYR7 527 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 GPD1LQ8N335 351 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 OR13C3Q8NGS6 347 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 VANGL1Q8TAA9 524 aaPredicted RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 SMAP2Q8WU79 429 aaPredicted RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 SLCO2A1Q92959 643 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 SLAMF9Q96A28 289 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 SPACA9Q96E40 222 aaPredicted RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 C10orf90Q96M02 699 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 OPA3Q9H6K4 179 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 PPANQ9NQ55 473 aaKnown RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 FAM207AQ9NSI2 230 aaPredicted RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 OR6C2Q9NZP2 312 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 CRNNQ9UBG3 495 aaPredicted RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 STUB1Q9UNE7 303 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 PPIEQ9UNP9 301 aaKnown RBP2.88□□□□□ -1.95
XRN1-206ENST00000467077 TNNQ9UQP3 1299 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 PPP2R2CQ9Y2T4 447 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 MCM3APO60318 1980 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 SIP14410 1827 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 SALL1Q9NSC2 1324 aa2.88□□□□□ -1.95
XRN1-206ENST00000467077 PTPRSQ13332 1948 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 RFX7Q2KHR2 1363 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 VPS13AQ96RL7 3174 aa2.87□□□□□ -1.95
XRN1-206ENST00000467077 BDP1A6H8Y1 2624 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms