RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 TXNDC9O14530 226 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 NKX2-8O15522 239 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SEC14L5O43304 696 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KRT34O76011 436 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 BEST1O76090 585 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 IPO13O94829 963 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 WDR47O94967 919 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 METTL18O95568 372 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CER1O95813 267 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 BCL10O95999 233 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 NDUFB10O96000 172 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 IFNB1P01574 187 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 HLA-DRAP01903 254 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KRT6AP02538 564 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KRT6BP04259 564 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CFIP05156 583 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FGF4P08620 206 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 C1SP09871 688 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CCDC159P0C7I6 412 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KRT3P12035 628 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 EEF2P13639 858 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 TCF4P15884 667 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 PGAM1P18669 254 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 MATN1P21941 496 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 PCMT1P22061 227 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 IL12AP29459 219 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 AXLP30530 894 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 HOXC8P31273 242 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 YWHABP31946 246 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 RYKP34925 604 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CAPGP40121 348 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ACADSBP45954 432 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 GSTM5P46439 218 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CLK1P49759 484 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 EIF2B2P49770 351 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 JAK3P52333 1124 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 PPP5CP53041 499 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 LIMK2P53671 638 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 MLLT10P55197 1068 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CDH15P55291 814 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TIRAPP58753 221 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 LILRA4P59901 499 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 PSME3P61289 254 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 YWHAEP62258 255 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 MRPS22P82650 360 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 RBP5P82980 135 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 IFITM3Q01628 133 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 EIF2B5Q13144 721 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 IL18R1Q13478 541 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KRR1Q13601 381 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 CBFBQ13951 182 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 BOP1Q14137 746 aaKnown RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 SQLEQ14534 574 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 DLG2Q15700 870 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 DPYSL2Q16555 572 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CTF1Q16619 201 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 HIST2H2ACQ16777 129 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 LRRC36Q1X8D7 754 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SLC9B1Q4ZJI4 515 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FGD3Q5JSP0 725 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TOR1AIP1Q5JTV8 583 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SPANXN3Q5MJ09 141 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TCHHL1Q5QJ38 904 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 ATAD3BQ5T9A4 648 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 GARNL3Q5VVW2 1013 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FAM90A2PQ658T7 463 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SEL1L3Q68CR1 1132 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KRT80Q6KB66 452 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CCDC144NLQ6NUI1 221 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 DNAJC24Q6P3W2 148 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 PLBD1Q6P4A8 553 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FAM171BQ6P995 826 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ZYG11AQ6WRX3 759 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 IKBIPQ70UQ0 350 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 MIER3Q7Z3K6 550 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 BNIPLQ7Z465 357 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 KCTD20Q7Z5Y7 419 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 GALNT7Q86SF2 657 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SNX32Q86XE0 403 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ZNF280BQ86YH2 543 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 EPHX4Q8IUS5 362 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CNTN4Q8IWV2 1026 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 PEX5LQ8IYB4 626 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 TBC1D21Q8IYX1 336 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CLYBLQ8N0X4 340 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ELMOD1Q8N336 334 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FAM109AQ8N4B1 249 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 PQLC3Q8N755 202 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 C12orf76Q8N812 135 aaPredicted RBP3.32□□□□□ -1.88
SORT1-202ENST00000466471 ZNF781Q8N8C0 355 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 FAM47BQ8NA70 645 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 SYT8Q8NBV8 401 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 MCPH1Q8NEM0 835 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 CHST13Q8NET6 341 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 ABHD11Q8NFV4 315 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 OR6J1Q8NGC5 347 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 OR6Q1Q8NGQ2 317 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 OR2T34Q8NGX1 318 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 OR2T3Q8NH03 318 aa3.32□□□□□ -1.88
SORT1-202ENST00000466471 DNAJB14Q8TBM8 379 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms