RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 MTTPP55157 894 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 RPS13P62277 151 aaKnown RBP16.04■□□□□ 0.16
USP39-211ENST00000465282 BTN3A2P78410 334 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 SRSF6Q13247 344 aaKnown RBP16.04■□□□□ 0.16
USP39-211ENST00000465282 DDX39BQ13838 428 aaKnown RBP16.04■□□□□ 0.16
USP39-211ENST00000465282 UGT8Q16880 541 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 MED25Q71SY5 747 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 PRSS41Q7RTY9 318 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 DTWD1Q8N5C7 304 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 CDYL2Q8N8U2 506 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 OR51Q1Q8NH59 317 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 THAP4Q8WY91 577 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 VPS50Q96JG6 964 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 QRFPRQ96P65 431 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 F2RL3Q96RI0 385 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 SPSB2Q99619 263 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 MECRQ9BV79 373 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 YIPF2Q9BWQ6 316 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 COPS7BQ9H9Q2 264 aaPredicted RBP16.04■□□□□ 0.16
USP39-211ENST00000465282 NKIRAS1Q9NYS0 192 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 AHSPQ9NZD4 102 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 CTSFQ9UBX1 484 aa16.04■□□□□ 0.16
USP39-211ENST00000465282 PTRH2Q9Y3E5 179 aaKnown RBP16.04■□□□□ 0.16
USP39-211ENST00000465282 SERTM1A2A2V5 107 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 UBFD1O14562 309 aaKnown RBP16.03■□□□□ 0.16
USP39-211ENST00000465282 FFAR3O14843 346 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 GPR42O15529 346 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 B3GALT2O43825 422 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 BMP10O95393 424 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 GRK2P25098 689 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 RAP1GDS1P52306 607 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 PLA2G16P53816 162 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 MPP2Q14168 576 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 RCN2Q14257 317 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 AP5B1Q2VPB7 878 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 HHATQ5VTY9 493 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 RAB43Q86YS6 212 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 GBP7Q8N8V2 638 aaPredicted RBP16.03■□□□□ 0.16
USP39-211ENST00000465282 OR6Y1Q8NGX8 325 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 ADAMTS18Q8TE60 1221 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 SELENOMQ8WWX9 145 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 ARL8AQ96BM9 186 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 OR51B5Q9H339 312 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 PRORYQ9H606 182 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 CPNE5Q9HCH3 593 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 PRDM7Q9NQW5 492 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 ACSS2Q9NR19 701 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 SEMA3GQ9NS98 782 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 MRPS18BQ9Y676 258 aaKnown RBP16.03■□□□□ 0.16
USP39-211ENST00000465282 LOC400499M0QZD8 3231 aa16.03■□□□□ 0.16
USP39-211ENST00000465282 ITPR1Q14643 2758 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 MANBAO00462 879 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 CHST10O43529 356 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 CNOT3O75175 753 aaKnown RBP16.02■□□□□ 0.16
USP39-211ENST00000465282 RDH16O75452 317 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 CRCPO75575 148 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 SCELO95171 688 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 FGF4P08620 206 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 UROSP10746 265 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 RNH1P13489 461 aaKnown RBP16.02■□□□□ 0.16
USP39-211ENST00000465282 NEK2P51955 445 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 RPS18P62269 152 aaKnown RBP16.02■□□□□ 0.16
USP39-211ENST00000465282 SNRPNP63162 240 aaKnown RBP16.02■□□□□ 0.16
USP39-211ENST00000465282 CXADRP78310 365 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 CDC20Q12834 499 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 CSTF3Q12996 717 aaKnown RBP16.02■□□□□ 0.16
USP39-211ENST00000465282 OR4C11Q6IEV9 310 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 GPR155Q7Z3F1 870 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 KIRREL3Q8IZU9 778 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 PPP1R14CQ8TAE6 165 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 TBC1D20Q96BZ9 403 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 MTFMTQ96DP5 389 aaKnown RBP16.02■□□□□ 0.16
USP39-211ENST00000465282 LYRM4Q9HD34 91 aa16.02■□□□□ 0.16
USP39-211ENST00000465282 MGAQ8IWI9 3026 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 TMEM114B3SHH9 223 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 C4orf51C9J302 202 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 PSMD12O00232 456 aaPredicted RBP16.01■□□□□ 0.15
USP39-211ENST00000465282 NKX2-8O15522 239 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 PDYNP01213 254 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 ITGB2P05107 769 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 SERPINE1P05121 402 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 HIST1H1TP22492 207 aaPredicted RBP16.01■□□□□ 0.15
USP39-211ENST00000465282 JAK1P23458 1154 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 MMP11P24347 488 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 ATP5A1P25705 553 aaKnown RBP16.01■□□□□ 0.15
USP39-211ENST00000465282 SSR2P43308 183 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 XCR1P46094 333 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 MAT1AQ00266 395 aaKnown RBP16.01■□□□□ 0.15
USP39-211ENST00000465282 KLC1Q07866 573 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 ERV3-1Q14264 604 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 VWA2Q5GFL6 755 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 ARL13AQ5H913 290 aaPredicted RBP16.01■□□□□ 0.15
USP39-211ENST00000465282 RNF165Q6ZSG1 346 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 PAGE2Q7Z2X7 111 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 UBE3DQ7Z6J8 389 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 ZC3H7AQ8IWR0 971 aaKnown RBP16.01■□□□□ 0.15
USP39-211ENST00000465282 ZCCHC7Q8N3Z6 543 aaKnown RBP16.01■□□□□ 0.15
USP39-211ENST00000465282 ACOT4Q8N9L9 421 aa16.01■□□□□ 0.15
USP39-211ENST00000465282 C7orf57Q8NEG2 295 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms