RNA–Protein interactions for RNA: ENST00000465068.5

NUP58-207, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-207ENST00000465068 CNDP1Q96KN2 507 aa12.89□□□□□ -0.35
NUP58-207ENST00000465068 KCNA7Q96RP8 456 aa12.89□□□□□ -0.35
NUP58-207ENST00000465068 SLC29A3Q9BZD2 475 aa12.89□□□□□ -0.35
NUP58-207ENST00000465068 C20orf27Q9GZN8 174 aa12.89□□□□□ -0.35
NUP58-207ENST00000465068 ANKHQ9HCJ1 492 aa12.89□□□□□ -0.35
NUP58-207ENST00000465068 MKKSQ9NPJ1 570 aaPredicted RBP12.89□□□□□ -0.35
NUP58-207ENST00000465068 ZNF282Q9UDV7 671 aaPredicted RBP12.89□□□□□ -0.35
NUP58-207ENST00000465068 PTRH2Q9Y3E5 179 aaKnown RBP12.89□□□□□ -0.35
NUP58-207ENST00000465068 CCL27Q9Y4X3 112 aa12.89□□□□□ -0.35
NUP58-207ENST00000465068 CFAP46Q8IYW2 2715 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 A0A0G2JN53 185 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 RTCAO00442 366 aaKnown RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 MANBAO00462 879 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 CYR61O00622 381 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 PLPP1O14494 284 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 SOCS6O14544 535 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 BIRC5O15392 142 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 NPHS1O60500 1241 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 PDYNP01213 254 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 CHRNGP07510 517 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 FGF4P08620 206 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 CD63P08962 238 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 PCNAP12004 261 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 CHN1P15882 459 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 ATP5A1P25705 553 aaKnown RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 PTX3P26022 381 aaPredicted RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 HTR6P50406 440 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 PLA2G16P53816 162 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 CXADRP78310 365 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 OLR1P78380 273 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 BTN3A2P78410 334 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 RHAGQ02094 409 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 TBL3Q12788 808 aaKnown RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 ERV3-1Q14264 604 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 RBBP7Q16576 425 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 LINC00303Q3SY05 128 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 MRM1Q6IN84 353 aaKnown RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 TMEM205Q6UW68 189 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 KIRREL2Q6UWL6 708 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 CDYL2Q8N8U2 506 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 ATP6V1E2Q96A05 226 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 MAGEB10Q96LZ2 347 aaPredicted RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 SORBS1Q9BX66 1292 aaKnown RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 CENPHQ9H3R5 247 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 SOX17Q9H6I2 414 aaPredicted RBP12.88□□□□□ -0.35
NUP58-207ENST00000465068 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 TRPC4Q9UBN4 977 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 MID2Q9UJV3 735 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 TIMM22Q9Y584 194 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 HS3ST3B1Q9Y662 390 aa12.88□□□□□ -0.35
NUP58-207ENST00000465068 LOC102723996A0A087X1L8 192 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 TMEM120BA0PK00 339 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 URADA6NGE7 173 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 FAM227AF5H4B4 570 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 SEMA3DO95025 777 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 ZWINTO95229 277 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 ENO1P06733 434 aaKnown RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 IL10P22301 178 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 HIST1H1TP22492 207 aaPredicted RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 MMP11P24347 488 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 MC1RQ01726 317 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 ABRAXAS2Q15018 415 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 TBR1Q16650 682 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 ARL13AQ5H913 290 aaPredicted RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 NIPAL1Q6NVV3 410 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 RNF165Q6ZSG1 346 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 SHISA6Q6ZSJ9 500 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 ZCCHC23Q6ZST2 131 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 CHSY3Q70JA7 882 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 MYLK4Q86YV6 388 aaPredicted RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 AMER2Q8N7J2 671 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 ACOT4Q8N9L9 421 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 CCDC63Q8NA47 563 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 TMEM52Q8NDY8 209 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 PLPP5Q8NEB5 264 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 PPP4R1Q8TF05 950 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 MIEF2Q96C03 454 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 REPS1Q96D71 796 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 MTFMTQ96DP5 389 aaKnown RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 PKNOX2Q96KN3 472 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 KCNC2Q96PR1 638 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 SERINC2Q96SA4 455 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 TRMOQ9BU70 441 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 VN1R1Q9GZP7 353 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 TUBB1Q9H4B7 451 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 DDX31Q9H8H2 851 aaKnown RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 ZNF395Q9H8N7 513 aaPredicted RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 BRF2Q9HAW0 419 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 MID1IP1Q9NPA3 183 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 ARGLU1Q9NWB6 273 aaPredicted RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 NXT1Q9UKK6 140 aaKnown RBP12.87□□□□□ -0.35
NUP58-207ENST00000465068 CCDC88CQ9P219 2028 aa12.87□□□□□ -0.35
NUP58-207ENST00000465068 ATRXP46100 2492 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms