RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 DCAF4L2Q8NA75 395 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 LINC00301Q8NCQ3 95 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 FBXL13Q8NEE6 735 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 GABPB2Q8TAK5 448 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 RAB7BQ96AH8 199 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 KLHL29Q96CT2 875 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 RTP4Q96DX8 246 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 PPP1R16AQ96I34 528 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 USP28Q96RU2 1077 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 WDR77Q9BQA1 342 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 H2AFJQ9BTM1 129 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 DNAI2Q9GZS0 605 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 MBNL1Q9NR56 388 aaKnown RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 SNTG1Q9NSN8 517 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 RAB20Q9NX57 234 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 HSPB7Q9UBY9 170 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 ERRFI1Q9UJM3 462 aaPredicted RBP4.67□□□□□ -1.66
COPS3-204ENST00000462236 KIAA1257Q9ULG3 409 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 CARD8Q9Y2G2 431 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 ATRQ13535 2644 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 SCN2AQ99250 2005 aa4.67□□□□□ -1.66
COPS3-204ENST00000462236 IGLV3-10A0A075B6K4 115 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 A0A0D9SEW6 157 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 EFCAB7A8K855 629 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 TMEM110-MUSTN1A8MSY1 372 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 EIF5BO60841 1220 aaKnown RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 CLDN11O75508 207 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 SEC14L2O76054 403 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 NDUFB8O95169 186 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CCNDBP1O95273 360 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 APOEP02649 317 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CLEC3BP05452 202 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 FGF2P09038 288 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 PAEPP09466 180 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 THRAP10827 490 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CHRNB2P17787 502 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 F8A1P23610 371 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 POU1F1P28069 291 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CD1CP29017 333 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 BSGP35613 385 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CASP2P42575 452 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 POLD2P49005 469 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CCR9P51686 369 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 THOP1P52888 689 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CDH4P55283 916 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 RPL7AP62424 266 aaKnown RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 SGCGQ13326 291 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CUL2Q13617 745 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 RABEP1Q15276 862 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 MEA1Q16626 185 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 DEFB109BQ30KR1 87 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 C14orf28Q4W4Y0 310 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 SLC9B1Q4ZJI4 515 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 ZCWPW2Q504Y3 356 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 RABGAP1LQ5R372 815 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 UBAP2Q5T6F2 1119 aaKnown RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 ATP1A1-AS1Q5TC04 95 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 SETD3Q86TU7 594 aaPredicted RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 TBC1D26Q86UD7 250 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 PIM3Q86V86 326 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 GPSM1Q86YR5 675 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 APLFQ8IW19 511 aaPredicted RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 FAM114A1Q8IWE2 563 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 DENND6AQ8IWF6 608 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 PCDH20Q8N6Y1 951 aaKnown RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 Q8N9G6 341 aaPredicted RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 OR4D9Q8NGE8 314 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 STARD8Q92502 1023 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 ART4Q93070 314 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 TSACCQ96A04 125 aaPredicted RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 ISG20Q96AZ6 181 aaKnown RBP4.66□□□□□ -1.66
COPS3-204ENST00000462236 HMCESQ96FZ2 354 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 CCDC114Q96M63 670 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 BLZF1Q9H2G9 400 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 SYNDIG1Q9H7V2 258 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 DYRK4Q9NR20 520 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 C20orf141Q9NUB4 165 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 OCIAD1Q9NX40 245 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 ANKRD10Q9NXR5 420 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 VPS28Q9UK41 221 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 ITM2BQ9Y287 266 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 ARID1AO14497 2285 aa4.66□□□□□ -1.66
COPS3-204ENST00000462236 NBEAL1Q6ZS30 2694 aa4.65□□□□□ -1.66
COPS3-204ENST00000462236 TMEM272A0A1B0GTI8 110 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 TCP11X1B4DZS4 312 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 MKRN2OSH3BPM6 223 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 SYF2O95926 243 aaKnown RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 HOXC4P09017 264 aaPredicted RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 PRKAR1AP10644 381 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 ARSBP15848 533 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 MYF6P23409 242 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 TRIM23P36406 574 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 SERPINH1P50454 418 aaKnown RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 MXI1P50539 228 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 CCNHP51946 323 aaPredicted RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 PMS2P54278 862 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 CDH12P55289 794 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 ZP1P60852 638 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 SRP54P61011 504 aaKnown RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 KRT83P78385 493 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms