RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CCDC80Q76M96 950 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 CLEC14AQ86T13 490 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 CARM1Q86X55 608 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 CBARPQ8N350 705 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-205ENST00000460170 RAB7BQ96AH8 199 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 MMP27Q9H306 513 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 EHD1Q9H4M9 534 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 KLHL31Q9H511 634 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 MAFFQ9ULX9 164 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 ZNF451Q9Y4E5 1061 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 KLHL18O94889 574 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 CDRT1O95170 752 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 SLC2A2P11168 524 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-205ENST00000460170 GBX2P52951 348 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-205ENST00000460170 RCAN2Q14206 197 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 GRHL3Q8TE85 626 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 ZNF689Q96CS4 500 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-205ENST00000460170 C3orf30Q96M34 536 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 BIRC8Q96P09 236 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 A0A0U1RQS6 177 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 VEGFDO43915 354 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 ZNF3P17036 446 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 IST1P53990 364 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 PPP2R2DQ66LE6 453 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 TMCO2Q7Z6W1 182 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-205ENST00000460170 ZNF675Q8TD23 568 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 RNF31Q96EP0 1072 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 ATOH8Q96SQ7 321 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 COMMD4Q9H0A8 199 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 WDR45Q9Y484 360 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 PMF1-BGLAPU3KQ54 211 aa14.21□□□□□ -0.13
PTPRU-205ENST00000460170 MAGEB3O15480 346 aa14.21□□□□□ -0.14
PTPRU-205ENST00000460170 PAK4O96013 591 aaPredicted RBP14.21□□□□□ -0.14
PTPRU-205ENST00000460170 PSKH1P11801 424 aa14.21□□□□□ -0.14
PTPRU-205ENST00000460170 ACADLP28330 430 aa14.21□□□□□ -0.14
PTPRU-205ENST00000460170 IL12BP29460 328 aa14.21□□□□□ -0.14
PTPRU-205ENST00000460170 CSTF1Q05048 431 aaKnown RBP14.21□□□□□ -0.14
PTPRU-205ENST00000460170 ELAVL3Q14576 367 aaKnown RBP14.21□□□□□ -0.14
PTPRU-205ENST00000460170 TRAM2Q15035 370 aa14.21□□□□□ -0.14
PTPRU-205ENST00000460170 EXOC3L2Q2M3D2 409 aa14.21□□□□□ -0.14
PTPRU-205ENST00000460170 XKR4Q5GH76 650 aa14.21□□□□□ -0.14
PTPRU-205ENST00000460170 HERC2P3Q9BVR0 1158 aa14.21□□□□□ -0.14
PTPRU-205ENST00000460170 NHSL1Q5SYE7 1610 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 TMEM150CB9EJG8 249 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 CTC1Q2NKJ3 1217 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 GTDC1Q4AE62 458 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 ARL9Q6T311 187 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 KLHL24Q6TFL4 600 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 TMEM25Q86YD3 366 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 PRSS58Q8IYP2 241 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 SETD7Q8WTS6 366 aaKnown RBP14.2□□□□□ -0.14
PTPRU-205ENST00000460170 DMRTB1Q96MA1 342 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 BHLHE41Q9C0J9 482 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-205ENST00000460170 TCF7L1Q9HCS4 588 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 PPIEQ9UNP9 301 aaKnown RBP14.2□□□□□ -0.14
PTPRU-205ENST00000460170 PCDHB14Q9Y5E9 798 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 DDX60LQ5H9U9 1706 aaKnown RBP14.2□□□□□ -0.14
PTPRU-205ENST00000460170 GRXCR2A6NFK2 248 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 ELOA3DA6NLF2 546 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-205ENST00000460170 ATP6V1G1O75348 118 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 GABRB3P28472 473 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 ELOA3BQ3SY89 546 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 CDKL4Q5MAI5 379 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 CLECL1Q8IZS7 167 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 ELOA3Q8NG57 546 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 CNDP2Q96KP4 475 aaKnown RBP14.2□□□□□ -0.14
PTPRU-205ENST00000460170 IL17FQ96PD4 163 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 TRNT1Q96Q11 434 aaKnown RBP14.2□□□□□ -0.14
PTPRU-205ENST00000460170 CD180Q99467 661 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 SLC30A2Q9BRI3 323 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 COPS7AQ9UBW8 275 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 EBF1Q9UH73 591 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 FAM172BPA6NC97 362 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 SLC1A7O00341 560 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 SCAMP2O15127 329 aaKnown RBP14.2□□□□□ -0.14
PTPRU-205ENST00000460170 ACSL1P33121 698 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 CLCN7P51798 805 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 GABARAPL2P60520 117 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 GINS1Q14691 196 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 NIPAL1Q6NVV3 410 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 TCEAL8Q8IYN2 117 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 HMGB4Q8WW32 186 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 CDC14AQ9UNH5 594 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 IQCMA0A1B0GVH7 501 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 CCRL2O00421 344 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 RETP07949 1114 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 MEDAGQ5VYS4 303 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 PGM2L1Q6PCE3 622 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 PAMR1Q6UXH9 720 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 ADGRG5Q8IZF4 528 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 APIPQ96GX9 242 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 SLC39A13Q96H72 371 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 XKR8Q9H6D3 395 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 SEC14L4Q9UDX3 406 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 GPR45Q9Y5Y3 372 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 HSPE1-MOB4S4R3N1 261 aa14.2□□□□□ -0.14
PTPRU-205ENST00000460170 LAMB1P07942 1786 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 PRAMEF33A0A0G2JMD5 474 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 PRAMEF10O60809 474 aa14.19□□□□□ -0.14
PTPRU-205ENST00000460170 LAMP1P11279 417 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms