RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
HDAC9-218ENST00000456174 LHX3Q9UBR4 397 aa7.35□□□□□ -1.23
HDAC9-218ENST00000456174 EGFL7Q9UHF1 273 aa7.35□□□□□ -1.23
HDAC9-218ENST00000456174 SPATA2Q9UM82 520 aa7.35□□□□□ -1.23
HDAC9-218ENST00000456174 BAIAP2Q9UQB8 552 aa7.35□□□□□ -1.23
HDAC9-218ENST00000456174 CCL26Q9Y258 94 aa7.35□□□□□ -1.23
HDAC9-218ENST00000456174 PCDHGC4Q9Y5F7 938 aa7.35□□□□□ -1.23
HDAC9-218ENST00000456174 ARL5AQ9Y689 179 aa7.35□□□□□ -1.23
HDAC9-218ENST00000456174 LOC100130705A0A1B0GUX0 176 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 FAM95CA0A1B0GW59 222 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 A0A1B0GWJ7 208 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 SLC22A23A1A5C7 686 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 MFSD2BA6NFX1 497 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 FXYD1O00168 92 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 RGS10O43665 173 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 XPNPEP2O43895 674 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 GPR37L1O60883 481 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 MOSPD3O75425 235 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CLN5O75503 358 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 PGLSO95336 258 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 MT-CO1P00395 513 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CYBBP04839 570 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 RB1P06400 928 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ACSM4P0C7M7 580 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 HSMCR30P0CW71 290 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 HOXA6P31267 233 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 GRIA4P48058 902 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 STARP49675 285 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ARSDP51689 593 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CDH13P55290 713 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 IRF9Q00978 393 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 SCN1BQ07699 218 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 DGCR6Q14129 220 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 PTPRCAPQ14761 206 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 GPR68Q15743 365 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 TUSC1Q2TAM9 212 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CYP27C1Q4G0S4 372 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 SLC35F1Q5T1Q4 408 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ALKBH2Q6NS38 261 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 B3GNT8Q7Z7M8 397 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 SLC41A1Q8IVJ1 513 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CAMKK1Q8N5S9 505 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 OR6S1Q8NH40 331 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 FIBINQ8TAL6 211 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 PYCR2Q96C36 320 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 DPYSL5Q9BPU6 564 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 SRRQ9GZT4 340 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 MFSD1Q9H3U5 465 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 TASP1Q9H6P5 420 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 IL1RAPQ9NPH3 570 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 LYARQ9NX58 379 aaKnown RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CTSFQ9UBX1 484 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 UBQLN2Q9UHD9 624 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 KIF25Q9UIL4 384 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CLEC4EQ9ULY5 219 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 RNF6Q9Y252 685 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 FCF1Q9Y324 198 aaKnown RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 RAI2Q9Y5P3 530 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 V9GYH0 126 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ATG2AQ2TAZ0 1938 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 A0A1W2PP18 115 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 A0A1W2PQ09 198 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 TMEM82A0PJX8 343 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 RAB19A4D1S5 217 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 SLC35F4A4IF30 521 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 DNASE2O00115 360 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 PER2O15055 1255 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 UBDO15205 165 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 GALR2O43603 387 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 EIF1BO60739 113 aaKnown RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 TULP3O75386 442 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CA3P07451 260 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 HBQ1P09105 142 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 HNRNPA1P09651 372 aaKnown RBP eCLIP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 GADD45AP24522 165 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 HOXA9P31269 272 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 EIF1P41567 113 aaKnown RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 MTHFRP42898 656 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CSRP3P50461 194 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 PGGT1BP53609 377 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 RAB14P61106 215 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 RRAS2P62070 204 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ALDH6A1Q02252 535 aaKnown RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ACVR1Q04771 509 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 LGALS3BPQ08380 585 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 LMAN2Q12907 356 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ETFDHQ16134 617 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 BAK1Q16611 211 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ZNF789Q5FWF6 425 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 TOR1AIP1Q5JTV8 583 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 ZNF697Q5TEC3 545 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 FAM109BQ6ICB4 259 aaPredicted RBP7.34□□□□□ -1.23
HDAC9-218ENST00000456174 NCEH1Q6PIU2 408 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CNSTQ6PJW8 725 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 PAMR1Q6UXH9 720 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 GPR155Q7Z3F1 870 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 NLRP8Q86W28 1048 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 KRT73Q86Y46 540 aa7.34□□□□□ -1.23
HDAC9-218ENST00000456174 CILP2Q8IUL8 1156 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms