RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 COPS4Q9BT78 406 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SLC6A16Q9GZN6 736 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 TPK1Q9H3S4 243 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 UPK1AO00322 258 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 UGT2B11O75310 529 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 FGF19O95750 216 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 RETP07949 1114 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 DDX6P26196 483 aaKnown RBP eCLIP11.47□□□□□ -0.572e-8■■■■■ 34.9
SMPD4-213ENST00000454468 TTKP33981 857 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 ALDH3B2P48448 385 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 IFI44LQ53G44 452 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 NXPE4Q6UWF7 544 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 ZBTB8BQ8NAP8 495 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 GOLM1Q8NBJ4 401 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 PSD4Q8NDX1 1056 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 OR4E2Q8NGC2 313 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 STARD8Q92502 1023 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 RPL3LQ92901 407 aaKnown RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 DACH2Q96NX9 599 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 ANKRA2Q9H9E1 313 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 PLGRKTQ9HBL7 147 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF282Q9UDV7 671 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SEC14L3Q9UDX4 400 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 DPP7Q9UHL4 492 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SNX11Q9Y5W9 270 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 ST14Q9Y5Y6 855 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 CACNA1IQ9P0X4 2223 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SLC16A5O15375 505 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 PRSS23O95084 383 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 GADD45GO95257 159 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 IDSP22304 550 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 C21orf33P30042 268 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 TGFBR1P36897 503 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 NCS1P62166 190 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 EXOC3L2Q2M3D2 409 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 KLHL35Q6PF15 583 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 TERB1Q8NA31 727 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SMARCD2Q92925 531 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 MBOAT4Q96T53 435 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 CHCHD6Q9BRQ6 235 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 RBM38Q9H0Z9 239 aaKnown RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 TM9SF3Q9HD45 589 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 IL1RAPQ9NPH3 570 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 TIMMDC1Q9NPL8 285 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 ZCCHC3Q9NUD5 404 aaKnown RBP11.47□□□□□ -0.57
SMPD4-213ENST00000454468 DAPK2Q9UIK4 370 aa11.47□□□□□ -0.57
SMPD4-213ENST00000454468 SCN3AQ9NY46 2000 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 CCDC88CQ9P219 2028 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 ZNF99A8MXY4 864 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-213ENST00000454468 ERI3O43414 337 aaKnown RBP11.46□□□□□ -0.57
SMPD4-213ENST00000454468 PSIP1O75475 530 aaKnown RBP11.46□□□□□ -0.57
SMPD4-213ENST00000454468 OCM2P0CE71 109 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 OCMP0CE72 109 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-213ENST00000454468 KELP23276 732 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 ATP6V1E1P36543 226 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 P2RY2P41231 377 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 TMED10P49755 219 aaKnown RBP11.46□□□□□ -0.57
SMPD4-213ENST00000454468 RPS3AP61247 264 aaKnown RBP11.46□□□□□ -0.57
SMPD4-213ENST00000454468 RFX4Q33E94 735 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 C9orf64Q5T6V5 341 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 SDE2Q6IQ49 451 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 OR5D16Q8NGK9 328 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 PSMA8Q8TAA3 256 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 GAB3Q8WWW8 586 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 NDEL1Q9GZM8 345 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 MIR1-1HGQ9H1L0 117 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 ITM2CQ9NQX7 267 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 ANGPT4Q9Y264 503 aa11.46□□□□□ -0.57
SMPD4-213ENST00000454468 SLC5A10A0PJK1 596 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 SEPHS1P49903 392 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 CTBSQ01459 385 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 ID2Q02363 134 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 NFATC3Q12968 1075 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 LEXMQ3ZCV2 418 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF542PQ5EBM4 170 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 FAM46CQ5VWP2 391 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 PTCHD4Q6ZW05 846 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 ZNF554Q86TJ5 538 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 FAM217AQ8IXS0 508 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 CCDC116Q8IYX3 515 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 NACC2Q96BF6 587 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 TESCQ96BS2 214 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 ZHX1-C8orf76Q96EF9 292 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 TRIT1Q9H3H1 467 aaKnown RBP11.46□□□□□ -0.58
SMPD4-213ENST00000454468 DMRT3Q9NQL9 472 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 MBNL1Q9NR56 388 aaKnown RBP11.46□□□□□ -0.58
SMPD4-213ENST00000454468 ABCB10Q9NRK6 738 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 RLIMQ9NVW2 624 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 TAS2R9Q9NYW1 312 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 FBXO10Q9UK96 956 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 ERVK-11Q9UQG0 969 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 PCDHGB3Q9Y5G1 929 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 PCYT1BQ9Y5K3 369 aaPredicted RBP11.46□□□□□ -0.58
SMPD4-213ENST00000454468 SMIM30A4D0T7 59 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 GSAPA4D1B5 854 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 RB1P06400 928 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 CD36P16671 472 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 CLDN2P57739 230 aa11.46□□□□□ -0.58
SMPD4-213ENST00000454468 NPRL3Q12980 569 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms