RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 CISD2Q8N5K1 135 aaKnown RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 LRRN4CLQ8ND94 238 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 OR2L5Q8NG80 312 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 UHMK1Q8TAS1 419 aaKnown RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 ZNF473Q8WTR7 871 aaKnown RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 HAS2Q92819 552 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 NPLQ9BXD5 320 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 REXO4Q9GZR2 422 aaKnown RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 ASF1BQ9NVP2 202 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 ZNF358Q9NW07 568 aa13.69□□□□□ -0.22
HSPG2-207ENST00000453796 RP1L1Q8IWN7 2480 aaPredicted RBP13.69□□□□□ -0.22
HSPG2-207ENST00000453796 HIVEP3Q5T1R4 2406 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 TCRBV16S1A1N1A0A5B0 115 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 LRRC14BA6NHZ5 514 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 FAM227AF5H4B4 570 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 B4GALT2O60909 372 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 VPS4BO75351 444 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 ABHD2P08910 425 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 GNLYP22749 145 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 CNTFP26441 200 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 ALDH18A1P54886 795 aaKnown RBP13.68□□□□□ -0.22
HSPG2-207ENST00000453796 ZNF169Q14929 603 aaPredicted RBP13.68□□□□□ -0.22
HSPG2-207ENST00000453796 PCBP2Q15366 365 aaKnown RBP eCLIP13.68□□□□□ -0.22
HSPG2-207ENST00000453796 PAGE2BQ5JRK9 111 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 GRHL2Q6ISB3 625 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 ABHD17CQ6PCB6 329 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 IFT20Q8IY31 132 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 CATSPER1Q8NEC5 780 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 M1APQ8TC57 530 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 CCT6BQ92526 530 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 NPAS2Q99743 824 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 MS4A8Q9BY19 250 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 TXLNGYQ9BZA5 131 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 RNF32Q9H0A6 362 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 VPS11Q9H270 941 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 MMP25Q9NPA2 562 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 NECTIN3Q9NQS3 549 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 PRDM7Q9NQW5 492 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 VPS4AQ9UN37 437 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 CLDN16Q9Y5I7 305 aa13.68□□□□□ -0.22
HSPG2-207ENST00000453796 ZGRF1Q86YA3 2104 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 TCP11X1B4DZS4 312 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 POC1B-GALNT4F8VUJ3 575 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 PRMT3O60678 531 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 KRT38O76015 456 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 FAM153BP0C7A2 387 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 RHOXF2BP0C7M4 288 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 EPB42P16452 691 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 MAOAP21397 527 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 MSH2P43246 934 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 PLA2G16P53816 162 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 RAB38P57729 211 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 OR4D2P58180 307 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 SLC26A5P58743 744 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 TLR1Q15399 786 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 EXT1Q16394 746 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 HIST2H2ACQ16777 129 aaPredicted RBP13.67□□□□□ -0.22
HSPG2-207ENST00000453796 PFKFB4Q16877 469 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 FAM153CQ494X1 144 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 HIST2H2AA3Q6FI13 130 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 RPUSD3Q6P087 351 aaKnown RBP13.67□□□□□ -0.22
HSPG2-207ENST00000453796 KLC3Q6P597 504 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 TRIM40Q6P9F5 258 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 UBE3DQ7Z6J8 389 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 SCUBE1Q8IWY4 988 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 TEX9Q8N6V9 391 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 TMEM52Q8NDY8 209 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 OR7G3Q8NG95 312 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 FAR2Q96K12 515 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 CNDP1Q96KN2 507 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 PTCHD1Q96NR3 888 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 F2RL3Q96RI0 385 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 LPAR4Q99677 370 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 RHOXF2Q9BQY4 288 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 EPB41L4BQ9H329 900 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 PRDM9Q9NQV7 894 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 PLA2G3Q9NZ20 509 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 TSC22D4Q9Y3Q8 395 aa13.67□□□□□ -0.22
HSPG2-207ENST00000453796 COPG1Q9Y678 874 aaKnown RBP13.67□□□□□ -0.22
HSPG2-207ENST00000453796 DYTNA2CJ06 578 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 TRIM49D1C9J1S8 452 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 TGFBR3LH3BV60 316 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 PSMD12O00232 456 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-207ENST00000453796 E2F3O00716 465 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 RIPK2O43353 540 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 SCELO95171 688 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 SIX3O95343 332 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-207ENST00000453796 WDPCPO95876 746 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 COL6A2P12110 1019 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 GFAPP14136 432 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-207ENST00000453796 TNFSF10P50591 281 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 HNRNPFP52597 415 aaKnown RBP13.66□□□□□ -0.22
HSPG2-207ENST00000453796 ACTN3Q08043 901 aaPredicted RBP13.66□□□□□ -0.22
HSPG2-207ENST00000453796 UBAP2LQ14157 1087 aaKnown RBP13.66□□□□□ -0.22
HSPG2-207ENST00000453796 LIPJQ5W064 366 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 METTL2BQ6P1Q9 378 aaKnown RBP13.66□□□□□ -0.22
HSPG2-207ENST00000453796 MED27Q6P2C8 311 aa13.66□□□□□ -0.22
HSPG2-207ENST00000453796 ADGRD1Q6QNK2 874 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms