RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FBXL20Q96IG2 436 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 DUSP26Q9BV47 211 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 GTPBP2Q9BX10 602 aaKnown RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 LGR4Q9BXB1 951 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 GRIP2Q9C0E4 1043 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 EXO1Q9UQ84 846 aaKnown RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 SNX11Q9Y5W9 270 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 PCM1Q15154 2024 aa10.26□□□□□ -0.77
PKP4-206ENST00000452162 ARID1BQ8NFD5 2236 aaPredicted RBP10.26□□□□□ -0.77
PKP4-206ENST00000452162 GABRR3A8MPY1 467 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 EVPLLA8MZ36 301 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 VILLO15195 856 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 PCDH7O60245 1069 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ERGP11308 486 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 GPX2P18283 190 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 KELP23276 732 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 HPCAL1P37235 193 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ALDH3A2P51648 485 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ARSFP54793 590 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 TSTA3Q13630 321 aaPredicted RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 DAG1Q14118 895 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 IRF4Q15306 451 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ADRM1Q16186 407 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 KCTD21Q4G0X4 260 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 PRAMEF14Q5SWL7 426 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ABI3BPQ7Z7G0 1075 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 LRRTM4Q86VH4 590 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 DCUN1D3Q8IWE4 304 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ZZZ3Q8IYH5 903 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 DHRSXQ8N5I4 330 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 OR13H1Q8NG92 308 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.25□□□□□ -0.77
PKP4-206ENST00000452162 SETD7Q8WTS6 366 aaKnown RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 CYGBQ8WWM9 190 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 RAD51AP1Q96B01 352 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 IL17FQ96PD4 163 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 EDEM2Q9BV94 578 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 TEX101Q9BY14 249 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 RBM38Q9H0Z9 239 aaKnown RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 CAAP1Q9H8G2 361 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ATP6V1HQ9UI12 483 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 PLAGL1Q9UM63 463 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ASF1AQ9Y294 204 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 HS3ST3A1Q9Y663 406 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 GMEB1Q9Y692 573 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 PCNX2A6NKB5 2137 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 TRIM64A6NGJ6 449 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 TLR4O00206 839 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 CDX4O14627 284 aaPredicted RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 KCNK5O95279 499 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 HPRP00739 348 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 ALPLP05186 524 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 FESP07332 822 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 THEGLP0DJG4 465 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 HOXB6P17509 224 aaKnown RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 TEAD1P28347 426 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 NR1H2P55055 460 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 LAPTM5Q13571 262 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 CPTPQ5TA50 214 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 PRAMEF13Q5VWM6 474 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 METRNLQ641Q3 311 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 CPZQ66K79 652 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 LCTLQ6UWM7 567 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 COMMD6Q7Z4G1 85 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 PTOV1Q86YD1 416 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 DENND6BQ8NEG7 585 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 CXorf40BQ96DE9 158 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 KLHDC7BQ96G42 594 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 HAUS8Q9BT25 410 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 CLK4Q9HAZ1 481 aaKnown RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 IL21RQ9HBE5 538 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 TM7SF3Q9NS93 570 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 PCDHB11Q9Y5F2 797 aa10.25□□□□□ -0.77
PKP4-206ENST00000452162 DNMT3AQ9Y6K1 912 aaPredicted RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 GOLGA4Q13439 2230 aaKnown RBP10.25□□□□□ -0.77
PKP4-206ENST00000452162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 C1orf226A1L170 272 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 TRIM64CA6NLI5 447 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 H0YAE9 185 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 KLHL18O94889 574 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 CCNDBP1O95273 360 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 CPSF4O95639 269 aaKnown RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 CST1P01037 141 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 SYPP08247 313 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 PIK3CBP42338 1070 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 CTSKP43235 329 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 MAGEA2P43356 314 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 C21orf59P57076 290 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 MEF2AQ02078 507 aaPredicted RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 ZNF763Q0D2J5 394 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 HIST2H2ACQ16777 129 aaPredicted RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 HLA-BQ31612 363 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 TPRG1LQ5T0D9 272 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 OTUD3Q5T2D3 398 aaPredicted RBP10.24□□□□□ -0.77
PKP4-206ENST00000452162 HIST2H2AA3Q6FI13 130 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 Q6ZSR6 202 aa10.24□□□□□ -0.77
PKP4-206ENST00000452162 ZNF621Q6ZSS3 439 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms