RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RPS26P11Q5JNZ5 115 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 SYT6Q5T7P8 510 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 CDC73Q6P1J9 531 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 NPAS3Q8IXF0 933 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 C10orf53Q8N6V4 93 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 DNAJC5GQ8N7S2 189 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 OR10H4Q8NGA5 316 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 ASB15Q8WXK1 588 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 TTYH1Q9H313 450 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-204ENST00000449510 SCN9AQ15858 1988 aa11.94□□□□□ -0.5
UBE3B-204ENST00000449510 A0A1B0GVM2 712 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 IGFBP1P08833 259 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 EVI2BP34910 448 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 BDKRB1P46663 353 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 SLC3A1Q07837 685 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 GINS1Q14691 196 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 RASSF5Q8WWW0 418 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 CRELD1Q96HD1 420 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 TXNDC15Q96J42 360 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 LRR1Q96L50 414 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 SLC38A2Q96QD8 506 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 PSKH2Q96QS6 385 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 BCL7BQ9BQE9 202 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 WRAP53Q9BUR4 548 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 SLIRPQ9GZT3 109 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 ABCG5Q9H222 651 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 LINC00597Q9H2U6 94 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 ZFR2Q9UPR6 939 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 RPL36Q9Y3U8 105 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 PRAMEF12O95522 483 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 SLC19A1P41440 591 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 LRRC32Q14392 662 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 TEAD4Q15561 434 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 TRIM71Q2Q1W2 868 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 PIAS4Q8N2W9 510 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 MEIOBQ8N635 442 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 LKAAEAR1Q8TD35 194 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 RNF121Q9H920 327 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 EXTL2Q9UBQ6 330 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 FBXO9Q9UK97 447 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 TNRC6CQ9HCJ0 1690 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 ARHGEF33A8MVX0 844 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 EEF1E1O43324 174 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 CDK1P06493 297 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 RPS19P39019 145 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 NSG1P42857 185 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 MAPKAPK2P49137 400 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 NFATC2Q13469 925 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 CTSL3PQ5NE16 218 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 MACC1Q6ZN28 852 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 USP51Q70EK9 711 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 OLIG3Q7RTU3 272 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 SNX20Q7Z614 316 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 ADGRD2Q7Z7M1 963 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 IQCHQ86VS3 1027 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 RIMKLAQ8IXN7 391 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 GPC2Q8N158 579 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 GALNT6Q8NCL4 622 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 VMP1Q96GC9 406 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 TRMT61BQ9BVS5 477 aaKnown RBP11.93□□□□□ -0.5
UBE3B-204ENST00000449510 BRINP2Q9C0B6 783 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 CDCP1Q9H5V8 836 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 HCN2Q9UL51 889 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 NCKAP1Q9Y2A7 1128 aa11.93□□□□□ -0.5
UBE3B-204ENST00000449510 ARAP2Q8WZ64 1704 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 EIF3FO00303 357 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 TEX28O15482 410 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 HOXC11O43248 304 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 SMSP52788 366 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 CDH4P55283 916 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 PIN1Q13526 163 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 SMUG1Q53HV7 270 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 BICRALQ6AI39 1079 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 PAQR6Q6TCH4 344 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 IL20RBQ6UXL0 311 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 MFSD4AQ8N468 514 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 TP53I13Q8NBR0 393 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 MYLIPQ8WY64 445 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 UFD1Q92890 307 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 TMEM80Q96HE8 168 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 CDADC1Q9BWV3 514 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 GULP1Q9UBP9 304 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 MROH6A6NGR9 719 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 ARNTLO00327 626 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 GNB5O14775 395 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 EPOP01588 193 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 C1QCP02747 245 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 GATMP50440 423 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 MAP4K2Q12851 820 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 KCNA10Q16322 511 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 C9orf131Q5VYM1 1079 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 SERPINA13PQ6UXR4 307 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 SAMD12Q8N8I0 201 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 FAM46DQ8NEK8 389 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 RIT1Q92963 219 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 TMEM169Q96HH4 297 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 DOK1Q99704 481 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 C11orf54Q9H0W9 315 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 HEBP1Q9NRV9 189 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 MGAT4AQ9UM21 535 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms