RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ZDHHC21Q8IVQ6 265 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ADHFE1Q8IWW8 467 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ADGRF3Q8IZF5 1079 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 OFCC1Q8IZS5 231 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ZNF786Q8N393 782 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 AMER3Q8N944 861 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 LCN9Q8WX39 176 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 NCSTNQ92542 709 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 DNASE1L2Q92874 299 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 RGMAQ96B86 450 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 TM4SF18Q96CE8 201 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 SCARF2Q96GP6 870 aaPredicted RBP9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 C17orf62Q9BQA9 187 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 DPH7Q9BTV6 452 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 MAGIXQ9H6Y5 334 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 C8orf4Q9NR00 106 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 TAAR2Q9P1P5 351 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 EBF1Q9UH73 591 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 PNMA8BQ9ULN7 279 aaPredicted RBP9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 MMP17Q9ULZ9 603 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 CORO2BQ9UQ03 480 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 MYO1GB0I1T2 1018 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 SEMA4FO95754 770 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ALBP02768 609 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 SMIM18P0DKX4 95 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 AKT2P31751 481 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ALDH3A2P51648 485 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 KIAA1024LP59773 190 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 CCINQ13939 588 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 PDE7AQ13946 482 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 PLCL1Q15111 1095 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 FBXO43Q4G163 708 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ANKRD34AQ69YU3 496 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 TTC33Q6PID6 262 aaPredicted RBP9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 Q6ZSR6 202 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 AMIGO1Q86WK6 493 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 TRIM69Q86WT6 500 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 RNF130Q86XS8 419 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 EID3Q8N140 333 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 SYNPOQ8N3V7 929 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 FBXL6Q8N531 539 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 OR2L3Q8NG85 312 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ASB12Q8WXK4 309 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 EXOSC8Q96B26 276 aaKnown RBP9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 QRFPRQ96P65 431 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ZNF717Q9BY31 904 aaPredicted RBP9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 KLHL31Q9H511 634 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 C6orf106Q9H6K1 298 aaPredicted RBP9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 PNPLA3Q9NST1 481 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 OLAHQ9NV23 265 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 TAS2R9Q9NYW1 312 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 ZNF639Q9UID6 485 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 RPS6KA6Q9UK32 745 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 BAG5Q9UL15 447 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 CYP8B1Q9UNU6 501 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 HEBP2Q9Y5Z4 205 aa9.09□□□□□ -0.95
COL6A4P1-201ENST00000446690 CROCCQ5TZA2 2017 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 LRIT2A6NDA9 550 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 PRR19A6NJB7 356 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 HAT1O14929 419 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 TMPRSS11DO60235 418 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 SH3BP5O60239 455 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 KDM1AO60341 852 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 SEMA3DO95025 777 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 PRSS23O95084 383 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 H6PDO95479 791 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 APBB3O95704 486 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 DDCP20711 480 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 CAPGP40121 348 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 BCL6P41182 706 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 SSR2P43308 183 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 MANFP55145 182 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 SRP54P61011 504 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 COL9A2Q14055 689 aaPredicted RBP9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 DAG1Q14118 895 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 HEPACAMQ14CZ8 416 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLC5A12Q1EHB4 618 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 CNPY1Q3B7I2 92 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 LIN52Q52LA3 116 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 CYBRD1Q53TN4 286 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZNF542PQ5EBM4 170 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 KIAA1614Q5VZ46 1190 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR4C11Q6IEV9 310 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 IKBIPQ70UQ0 350 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 TMEM179BQ7Z7N9 219 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 NUDT13Q86X67 352 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZC3H7AQ8IWR0 971 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZCCHC7Q8N3Z6 543 aaKnown RBP9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 TSPAN14Q8NG11 270 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 UCN3Q969E3 161 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 MTERF3Q96E29 417 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 RMND5BQ96G75 393 aaPredicted RBP9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 ASPSCR1Q9BZE9 553 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZNF696Q9H7X3 374 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 NT5DC2Q9H857 520 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLC6A20Q9NP91 592 aa9.08□□□□□ -0.96
COL6A4P1-201ENST00000446690 LHX9Q9NQ69 397 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms