RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 DPY19L3Q6ZPD9 716 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 TMPRSS11BQ86T26 416 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 MEX3DQ86XN8 651 aaKnown RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 SLC34A3Q8N130 599 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 WDR20Q8TBZ3 569 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 TP53INP1Q96A56 240 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 BARHL1Q9BZE3 327 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 ZNF556Q9HAH1 456 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 ZNF334Q9HCZ1 680 aaPredicted RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 ABCB8Q9NUT2 735 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 FAM120CQ9NX05 1096 aaKnown RBP13.64□□□□□ -0.23
ERCC3-203ENST00000445889 MKLN1Q9UL63 735 aa13.64□□□□□ -0.23
ERCC3-203ENST00000445889 H7C4K7 107 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 GABRB1P18505 474 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 SCARB2Q14108 478 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 VEZF1Q14119 521 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 GPNMBQ14956 572 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 SLC5A12Q1EHB4 618 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 OLIG3Q7RTU3 272 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 GPR155Q7Z3F1 870 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 FAM9CQ8IZT9 166 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 LILRB4Q8NHJ6 448 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 SCLYQ96I15 445 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 NECTIN4Q96NY8 510 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 CHST8Q9H2A9 424 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 SH2B3Q9UQQ2 575 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 RUVBL1Q9Y265 456 aaKnown RBP13.63□□□□□ -0.23
ERCC3-203ENST00000445889 HOXC11O43248 304 aaPredicted RBP13.63□□□□□ -0.23
ERCC3-203ENST00000445889 ENTPD6O75354 484 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 CKMP06732 381 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 C1SP09871 688 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 CHMP24386 653 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 MVDP53602 400 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 STARD3Q14849 445 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 ZFP69Q49AA0 526 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 ARMC4Q5T2S8 1044 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 AGTRAPQ6RW13 159 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 TPRG1Q6ZUI0 275 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 Q6ZVU0 165 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 HJURPQ8NCD3 748 aaPredicted RBP13.63□□□□□ -0.23
ERCC3-203ENST00000445889 VPS37AQ8NEZ2 397 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 OR7G3Q8NG95 312 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 OR2AP1Q8NGE2 309 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 VOPP1Q96AW1 172 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 SCRN2Q96FV2 425 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 ZFYVE19Q96K21 471 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 ASPNQ9BXN1 380 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 LINC00597Q9H2U6 94 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 ACER3Q9NUN7 267 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 TAS2R9Q9NYW1 312 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 CCDC59Q9P031 241 aaKnown RBP13.63□□□□□ -0.23
ERCC3-203ENST00000445889 YIPF1Q9Y548 306 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 EFCAB10A6NFE3 127 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 ADAMDEC1O15204 470 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 IGSF6O95976 241 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 ETV3P41162 512 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 SLAMF1Q13291 335 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 IFI44LQ53G44 452 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 RNF165Q6ZSG1 346 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 GPR65Q8IYL9 337 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 WDR48Q8TAF3 677 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 POP5Q969H6 163 aaKnown RBP13.63□□□□□ -0.23
ERCC3-203ENST00000445889 NEIL2Q969S2 332 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 PLCXD1Q9NUJ7 323 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 PADI2Q9Y2J8 665 aa13.63□□□□□ -0.23
ERCC3-203ENST00000445889 TMEM88BA6NKF7 163 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 C8GP07360 202 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 PTPN2P17706 415 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 CXCR2P25025 360 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 CHI3L1P36222 383 aaPredicted RBP13.62□□□□□ -0.23
ERCC3-203ENST00000445889 CTSCP53634 463 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 LSM11P83369 360 aaKnown RBP eCLIP13.62□□□□□ -0.23
ERCC3-203ENST00000445889 GPR162Q16538 588 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 MPEG1Q2M385 716 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 GGTA1PQ4G0N0 100 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 ATCAYQ86WG3 371 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 RBM45Q8IUH3 476 aaKnown RBP13.62□□□□□ -0.23
ERCC3-203ENST00000445889 PGBD3Q8N328 593 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 ZNF740Q8NDX6 193 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 C17orf50Q8WW18 174 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 DEPDC7Q96QD5 511 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 OR2A14Q96R47 310 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 WFDC6Q9BQY6 131 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 SUV39H2Q9H5I1 410 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 PAQR5Q9NXK6 330 aaPredicted RBP13.62□□□□□ -0.23
ERCC3-203ENST00000445889 C5AR2Q9P296 337 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 TRBV4-1A0A0J9YWV2 114 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 CENPXA8MT69 81 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 GFYI3L273 518 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 TSPAN6O43657 245 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 GREM1O60565 184 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 GADD45GO95257 159 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 CLEC2LP0C7M8 214 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 SRCP12931 536 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 LYPLAL1Q5VWZ2 237 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 ZNF544Q6NX49 715 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 TMIGD1Q6UXZ0 262 aa13.62□□□□□ -0.23
ERCC3-203ENST00000445889 ZNF517Q6ZMY9 492 aaPredicted RBP13.62□□□□□ -0.23
ERCC3-203ENST00000445889 TRIM48Q8IWZ4 208 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms