RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 PRKAB1Q9Y478 270 aa17.06■□□□□ 0.32
CLDN9-201ENST00000445369 TESMINQ9Y4I5 508 aa17.06■□□□□ 0.32
CLDN9-201ENST00000445369 ALPK3Q96L96 1907 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 TNFRSF11BO00300 401 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 PCDHGA12O60330 932 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 FAM20BO75063 409 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 MT-ND2P03891 347 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 TNFRSF1BP20333 461 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 NR4A1P22736 598 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 PTX3P26022 381 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 P2RY2P41231 377 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 RPA4Q13156 261 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 TMED1Q13445 227 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 SLC5A12Q1EHB4 618 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 SYT6Q5T7P8 510 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 TRIM40Q6P9F5 258 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 PSRC1Q6PGN9 363 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ADAMTSL4Q6UY14 1074 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 SLC9B2Q86UD5 537 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ZBTB46Q86UZ6 589 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 RNF130Q86XS8 419 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ENTHD1Q8IYW4 607 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 C12orf76Q8N812 135 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ZNF540Q8NDQ6 660 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 OR4C15Q8NGM1 316 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 OR5AK3PQ8NH89 298 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 PHOSPHO2Q8TCD6 241 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 GIPC3Q8TF64 312 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ASB16Q96NS5 453 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 SIGLEC11Q96RL6 698 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ZNF347Q96SE7 839 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 THSD1Q9NS62 852 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 PCDHGA6Q9Y5G7 932 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 A0A1W2PRB8 838 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 PRAMEF25A6NGN4 478 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 RGS10O43665 173 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 MAN1A2O60476 641 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 TBX6O95947 436 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 TPP2P29144 1249 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 PXNP49023 591 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 Q6ZNX1 250 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 KRT78Q8N1N4 520 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 UBE2FQ969M7 185 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 YIPF6Q96EC8 236 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ZNF300Q96RE9 604 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 SORBS1Q9BX66 1292 aaKnown RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 TMEM121BQ9BXQ6 578 aaPredicted RBP17.05■□□□□ 0.32
CLDN9-201ENST00000445369 TAAR2Q9P1P5 351 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ZNF451Q9Y4E5 1061 aa17.05■□□□□ 0.32
CLDN9-201ENST00000445369 ATG2AQ2TAZ0 1938 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 ARAFP10398 606 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 CHI3L1P36222 383 aaPredicted RBP17.04■□□□□ 0.32
CLDN9-201ENST00000445369 C21orf59P57076 290 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 PCBP3P57721 371 aaKnown RBP17.04■□□□□ 0.32
CLDN9-201ENST00000445369 CDK6Q00534 326 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 MVKQ03426 396 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 CYP2A13Q16696 494 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 ZNF630Q2M218 657 aaPredicted RBP17.04■□□□□ 0.32
CLDN9-201ENST00000445369 CRB2Q5IJ48 1285 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 PRSS48Q7RTY5 328 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 AMZ2Q86W34 360 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 MMP21Q8N119 569 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 SVOPQ8N4V2 548 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 C2orf73Q8N5S3 287 aaPredicted RBP17.04■□□□□ 0.32
CLDN9-201ENST00000445369 MIPOL1Q8TD10 442 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 HERVK_113Q902F9 699 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 PLEKHA8Q96JA3 519 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 HDAC8Q9BY41 377 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 SLC6A16Q9GZN6 736 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 RASSF1Q9NS23 344 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 SLC23A2Q9UGH3 650 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 ICKQ9UPZ9 632 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 MAP4K5Q9Y4K4 846 aa17.04■□□□□ 0.32
CLDN9-201ENST00000445369 C1QTNF3-AMACRE9PGA6 284 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 IL12RB1P42701 662 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 PRIM2P49643 509 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 CLCA4Q14CN2 919 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 TMC5Q6UXY8 1006 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 HEATR4Q86WZ0 1026 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 OR10G2Q8NGC3 310 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 IPCEF1Q8WWN9 437 aaPredicted RBP17.03■□□□□ 0.32
CLDN9-201ENST00000445369 TFGQ92734 400 aaPredicted RBP17.03■□□□□ 0.32
CLDN9-201ENST00000445369 RAB7BQ96AH8 199 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 FEVQ99581 238 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 ZNF717Q9BY31 904 aaPredicted RBP17.03■□□□□ 0.32
CLDN9-201ENST00000445369 RHBGQ9H310 441 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 EPS8L2Q9H6S3 715 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 PALMDQ9NP74 551 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 ACOT13Q9NPJ3 140 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 MIEF1Q9NQG6 463 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 PRKAG2Q9UGJ0 569 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 DGKBQ9Y6T7 804 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 PLPP1O14494 284 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 MAGEB3O15480 346 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 PFDN1O60925 122 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 KRT75O95678 551 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 FADS2O95864 444 aaKnown RBP17.03■□□□□ 0.32
CLDN9-201ENST00000445369 SOAT1P35610 550 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 OR1E2P47887 323 aa17.03■□□□□ 0.32
CLDN9-201ENST00000445369 SPIBQ01892 262 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms