RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 MRPS17Q9Y2R5 130 aaKnown RBP10.15□□□□□ -0.78
CALD1-210ENST00000443197 MGAMO43451 1857 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 TRBV5-4A0A0C4DH59 114 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 SDC3O75056 442 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 SEMA4FO95754 770 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 NDUFS1P28331 727 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 SKP1P63208 163 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 DEFB110Q30KQ9 67 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 PPP4R4Q6NUP7 873 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 GPR151Q8TDV0 419 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 SETD7Q8WTS6 366 aaKnown RBP10.15□□□□□ -0.78
CALD1-210ENST00000443197 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 PCDHGB3Q9Y5G1 929 aa10.15□□□□□ -0.78
CALD1-210ENST00000443197 ZSWIM8A7E2V4 1837 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 H3BNX3 289 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 GNB5O14775 395 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 B4GALT2O60909 372 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 UGT2B11O75310 529 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 MOSPD3O75425 235 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 ZNF821O75541 412 aaPredicted RBP10.15□□□□□ -0.79
CALD1-210ENST00000443197 OR12D1P0DN82 309 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 HSD3B1P14060 373 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 MAGP20916 626 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 HSD3B2P26439 372 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 BLKP51451 505 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 TARDBPQ13148 414 aaKnown RBP eCLIP10.15□□□□□ -0.79
CALD1-210ENST00000443197 GNA13Q14344 377 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 ATP6AP1Q15904 470 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 CNPY1Q3B7I2 92 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 CDKL4Q5MAI5 379 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 KHDRBS2Q5VWX1 349 aaKnown RBP10.15□□□□□ -0.79
CALD1-210ENST00000443197 POMZP3Q6PJE2 187 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 UNC5DQ6UXZ4 953 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 ZNF730Q6ZMV8 503 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 PLEKHM3Q6ZWE6 761 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 SVOPQ8N4V2 548 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 HHIPQ96QV1 700 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 NODALQ96S42 347 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 CLMPQ9H6B4 373 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 DMRT3Q9NQL9 472 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 KLHL42Q9P2K6 505 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 SLC23A2Q9UGH3 650 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 CD207Q9UJ71 328 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 GPR34Q9UPC5 381 aa10.15□□□□□ -0.79
CALD1-210ENST00000443197 PTPRZ1P23471 2315 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 BTN3A3O00478 584 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 XPNPEP2O43895 674 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 SOX14O95416 240 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 EGFP01133 1207 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 PIM1P11309 404 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 IL1RNP18510 177 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 DNAJA1P31689 397 aaKnown RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 MAPK11Q15759 364 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 XKR7Q5GH72 579 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 TLDC1Q6P9B6 456 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 Q6ZSR6 202 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 KLHDC8AQ8IYD2 350 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 OR52E1Q8NGJ3 308 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 NCSTNQ92542 709 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 FAM129BQ96TA1 746 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 SH3GL3Q99963 347 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 GSDMCQ9BYG8 508 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 TRPM7Q96QT4 1865 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 LOC100130705A0A1B0GUX0 176 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 A8MUA0 341 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 PRMT3O60678 531 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 MITFO75030 526 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 NPPBP16860 134 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 CTHP32929 405 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 KRT20P35900 424 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 VSX2P58304 361 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 DCDC1P59894 354 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 SIM1P81133 766 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 CTBSQ01459 385 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 RUNX1T1Q06455 604 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 NEK10Q6ZWH5 1172 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 GPR135Q8IZ08 494 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 FBXO15Q8NCQ5 510 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 MRGPRX3Q96LB0 322 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 PLA2G2FQ9BZM2 168 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 PCDHA9Q9Y5H5 950 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 KPNA4O00629 521 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 GAPDHSO14556 408 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 NME6O75414 186 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 CCNB2O95067 398 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 ACSL1P33121 698 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 CRISP3P54108 245 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 ZNF155Q12901 538 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 RUNDC3AQ59EK9 446 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 FAM83HQ6ZRV2 1179 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 ZCCHC7Q8N3Z6 543 aaKnown RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 ZNF583Q96ND8 569 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 LMAN2LQ9H0V9 348 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 EPB41L1Q9H4G0 881 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 CLN6Q9NWW5 311 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 MARK1Q9P0L2 795 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 DMTF1Q9Y222 760 aa10.14□□□□□ -0.79
CALD1-210ENST00000443197 MRPS33Q9Y291 106 aaKnown RBP10.14□□□□□ -0.79
CALD1-210ENST00000443197 MICAL3Q7RTP6 2002 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms