RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 ERRFI1Q9UJM3 462 aaPredicted RBP17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 CLDN16Q9Y5I7 305 aa17.76■□□□□ 0.43
HMGB3P22-201ENST00000442010 MAST4O15021 2626 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 TCRBV16S1A1N1A0A5B0 115 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 A8MUI8 341 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 MAN1A2O60476 641 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 PRMT3O60678 531 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 GP1BBP13224 206 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 MTHFD2P13995 350 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 EDN3P14138 238 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 ECHS1P30084 290 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 CASP2P42575 452 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 BTN3A2P78410 334 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 PCDH1Q08174 1060 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 TBCCQ15814 346 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 INAQ16352 499 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 XKR6Q5GH73 641 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 ACER2Q5QJU3 275 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 LRRC70Q7Z2Q7 622 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 TBC1D1Q86TI0 1168 aaPredicted RBP17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 CRLF3Q8IUI8 442 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 SNX31Q8N9S9 440 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 ELP5Q8TE02 316 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 EXT2Q93063 718 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 ZNF354BQ96LW1 612 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 NPLQ9BXD5 320 aaPredicted RBP17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 KCNK13Q9HB14 408 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 NECTIN3Q9NQS3 549 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 TEKT2Q9UIF3 430 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 MYO7BQ6PIF6 2116 aa17.75■□□□□ 0.43
HMGB3P22-201ENST00000442010 A0A0G2JN53 185 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 UBXN8O00124 270 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 ERI3O43414 337 aaKnown RBP17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 CCNT2O60583 730 aaKnown RBP17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 C2P06681 752 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 MAOAP21397 527 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 TDGF1P3P51864 188 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 IRF9Q00978 393 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 ACTN3Q08043 901 aaPredicted RBP17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 BMPR2Q13873 1038 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 MROH9Q5TGP6 573 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 FCRLBQ6BAA4 426 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 FAM180AQ6UWF9 173 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 CCDC91Q7Z6B0 441 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 BEST3Q8N1M1 668 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 BCORP1Q8N888 145 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 NFAM1Q8NET5 270 aaPredicted RBP17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 OR2L5Q8NG80 312 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 RHEBL1Q8TAI7 183 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 KCTD4Q8WVF5 259 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 EFCAB11Q9BUY7 163 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 ACSS3Q9H6R3 686 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 PRDM9Q9NQV7 894 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 ACOT9Q9Y305 439 aa17.74■□□□□ 0.43
HMGB3P22-201ENST00000442010 A0A087X1B8 175 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 ANKDD1BA6NHY2 528 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 LDLRP01130 860 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 ALDOAP04075 364 aaKnown RBP17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 S100BP04271 92 aaPredicted RBP17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 UQCRHP07919 91 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 CHIT1Q13231 466 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 LAPTM5Q13571 262 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 MEP1AQ16819 746 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 ABHD17CQ6PCB6 329 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 SCUBE1Q8IWY4 988 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 CCT6BQ92526 530 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 GPR78Q96P69 363 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 REXO4Q9GZR2 422 aaKnown RBP17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 CDC42EP4Q9H3Q1 356 aaKnown RBP17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 PRDM7Q9NQW5 492 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 SNX15Q9NRS6 342 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 MMACHCQ9Y4U1 282 aa17.73■□□□□ 0.43
HMGB3P22-201ENST00000442010 GTF3C1Q12789 2109 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 CCDC189A1A4V9 331 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 SAGE2PA6NJ88 616 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 SUPT3HB4E1H0 165 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 TGFBR3LH3BV60 316 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 PSMD12O00232 456 aaPredicted RBP17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 KLK8O60259 260 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 PRAMEF2O60811 474 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 SUPT3HO75486 399 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 DDAH2O95865 285 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 HNRNPFP52597 415 aaKnown RBP17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 RAB38P57729 211 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 IRF8Q02556 426 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 TUBA3CQ13748 450 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 ELOAQ14241 798 aaKnown RBP17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 TUBA3EQ6PEY2 450 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 UBE3DQ7Z6J8 389 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 LAS2Q8IYD9 372 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 LGI4Q8N135 537 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 KIF2BQ8N4N8 673 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 MDS2Q8NDY4 140 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 TMEM52Q8NDY8 209 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 ZNF473Q8WTR7 871 aaKnown RBP17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 ZNF592Q92610 1267 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 MRRFQ96E11 262 aaKnown RBP17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 FAR2Q96K12 515 aa17.72■□□□□ 0.43
HMGB3P22-201ENST00000442010 MAGEB10Q96LZ2 347 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms