RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 FAPQ12884 760 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 CSTF3Q12996 717 aaKnown RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 TARDBPQ13148 414 aaKnown RBP eCLIP8.23□□□□□ -1.09
HPS4-206ENST00000439453 SERINC3Q13530 473 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 TAF1AQ15573 450 aaPredicted RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 MS4A13Q5J8X5 152 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 RDH10Q8IZV5 341 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 VWA5B2Q8N398 1253 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 MDGA1Q8NFP4 955 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 C9orf43Q8TAL5 461 aaPredicted RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 UBASH3BQ8TF42 649 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 TPD52L3Q96J77 140 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 SMIM14Q96QK8 99 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 CNPPD1Q9BV87 410 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ASPNQ9BXN1 380 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 BARHL1Q9BZE3 327 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ATP13A2Q9NQ11 1180 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 KCNN3Q9UGI6 736 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 DLGAP4Q9Y2H0 992 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 FNDC3AQ9Y2H6 1198 aaKnown RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 SPEF1Q9Y4P9 236 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 VPS13AQ96RL7 3174 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 PRRG1O14668 218 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 RAMP2O60895 175 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 KCNK5O95279 499 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ALPPP05187 535 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 MC4RP32245 332 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 RPS19P39019 145 aaKnown RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 GDF5P43026 501 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 PXNP49023 591 aaPredicted RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 ASAH1Q13510 395 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 IQCCQ4KMZ1 466 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 ZRANB3Q5FWF4 1079 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 OR4F3Q6IEY1 312 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 FAM124AQ86V42 546 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 KRT73Q86Y46 540 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 LIX1LQ8IVB5 337 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 LAX1Q8IWV1 398 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 NPAS3Q8IXF0 933 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 IGSF8Q969P0 613 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 MTFMTQ96DP5 389 aaKnown RBP8.23□□□□□ -1.09
HPS4-206ENST00000439453 ZSWIM3Q96MP5 696 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 NECTIN4Q96NY8 510 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 FEVQ99581 238 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 FKBPLQ9UIM3 349 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 PPT2Q9UMR5 302 aa8.23□□□□□ -1.09
HPS4-206ENST00000439453 A0A0B4J293 547 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 C2orf81A6NN90 581 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 B4DXG7 233 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TLR5O60602 858 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 GABRB1P18505 474 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TUFMP49411 452 aaKnown RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 CLCN7P51798 805 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.22□□□□□ -1.09
HPS4-206ENST00000439453 DMC1Q14565 340 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 SSX1Q16384 188 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 RNF165Q6ZSG1 346 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 CIR1Q86X95 450 aaPredicted RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 TRIM48Q8IWZ4 208 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TCTE3Q8IZS6 198 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 GALNT6Q8NCL4 622 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DENND6BQ8NEG7 585 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 RNF31Q96EP0 1072 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 C7orf34Q96L11 122 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 FRMD6Q96NE9 622 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TSSK3Q96PN8 268 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 EXOSC4Q9NPD3 245 aaKnown RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 MS4A12Q9NXJ0 267 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DPP7Q9UHL4 492 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 PCDHGB3Q9Y5G1 929 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TECTAO75443 2155 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 ANHXE9PGG2 379 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 CLIC1O00299 241 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DPM1O60762 260 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 F11P03951 625 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 ENGP17813 658 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TBX4P57082 545 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TEKQ02763 1124 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 CDONQ4KMG0 1287 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 ERICH5Q6P6B1 374 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 PTOV1Q86YD1 416 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 PLCZ1Q86YW0 608 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 B3GNT7Q8NFL0 401 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DEDD2Q8WXF8 326 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 SLC39A13Q96H72 371 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 VPS35Q96QK1 796 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 SEPT5Q99719 369 aaPredicted RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 CCM2Q9BSQ5 444 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TTLL2Q9BWV7 592 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 C11orf54Q9H0W9 315 aaPredicted RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 VPS4AQ9UN37 437 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 DUSP12Q9UNI6 340 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 TLR6Q9Y2C9 796 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 ARIH1Q9Y4X5 557 aaPredicted RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 PCDHGA2Q9Y5H1 932 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 CFAP20Q9Y6A4 193 aaKnown RBP8.22□□□□□ -1.09
HPS4-206ENST00000439453 TTC28Q96AY4 2481 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 M0R129 80 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 PRAMEF11O60813 436 aa8.22□□□□□ -1.09
HPS4-206ENST00000439453 ADRA2AP08913 450 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms