RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 AGAP11Q8TF27 550 aa12.66□□□□□ -0.38
GARNL3-206ENST00000439286 CDKL2Q92772 493 aa12.66□□□□□ -0.38
GARNL3-206ENST00000439286 GAL3ST3Q96A11 431 aa12.66□□□□□ -0.38
GARNL3-206ENST00000439286 SMIM10Q96HG1 83 aa12.66□□□□□ -0.38
GARNL3-206ENST00000439286 SEC16BQ96JE7 1060 aa12.66□□□□□ -0.38
GARNL3-206ENST00000439286 TRIM31Q9BZY9 425 aa12.66□□□□□ -0.38
GARNL3-206ENST00000439286 PITHD1Q9GZP4 211 aaPredicted RBP12.66□□□□□ -0.38
GARNL3-206ENST00000439286 TRIM45Q9H8W5 580 aaPredicted RBP12.66□□□□□ -0.38
GARNL3-206ENST00000439286 CNOT10Q9H9A5 744 aaKnown RBP12.66□□□□□ -0.38
GARNL3-206ENST00000439286 COPS7BQ9H9Q2 264 aaPredicted RBP12.66□□□□□ -0.38
GARNL3-206ENST00000439286 PRTFDC1Q9NRG1 225 aa12.66□□□□□ -0.38
GARNL3-206ENST00000439286 PCM1Q15154 2024 aa12.66□□□□□ -0.38
GARNL3-206ENST00000439286 IGKV3D-11A0A0A0MRZ8 115 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 NCF1BA6NI72 391 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 USP27XA6NNY8 438 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 NCF1CA8MVU1 366 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 EFCAB8A8MWE9 144 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 E9PLN8 166 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 ERI3O43414 337 aaKnown RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 ZFAND5O76080 213 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 NCF1P14598 390 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 PTGS2P35354 604 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 MEOX1P50221 254 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 HSD17B7P56937 341 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 TAS2R39P59534 338 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 BMPR2Q13873 1038 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 SLBPQ14493 270 aaKnown RBP eCLIP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 ZNF460Q14592 562 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 TERF2Q15554 542 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 TSNQ15631 228 aaKnown RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 HIST2H2ACQ16777 129 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 HIST2H2AA3Q6FI13 130 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 TRIM40Q6P9F5 258 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 PAOXQ6QHF9 649 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 SIAH3Q8IW03 269 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 KLHDC8AQ8IYD2 350 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 CYP4Z2PQ8N1L4 340 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 BBOF1Q8ND07 529 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 NFAM1Q8NET5 270 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 CA5BP1Q8WTZ4 195 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 TSPAN17Q96FV3 270 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 VMP1Q96GC9 406 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 PDLIM2Q96JY6 352 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 VKORC1Q9BQB6 163 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 REXO4Q9GZR2 422 aaKnown RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 PLAC1Q9HBJ0 212 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 TIMMDC1Q9NPL8 285 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 WWOXQ9NZC7 414 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 GPRC5BQ9NZH0 403 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 IKZF3Q9UKT9 509 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 PPT2Q9UMR5 302 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 ERVK-11Q9UQG0 969 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 SAR1BQ9Y6B6 198 aa12.65□□□□□ -0.38
GARNL3-206ENST00000439286 PRRC2CQ9Y520 2896 aaKnown RBP12.65□□□□□ -0.38
GARNL3-206ENST00000439286 CCDC88CQ9P219 2028 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 CCDC188H7C350 402 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 PEX1O43933 1283 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 CDC40O60508 579 aaKnown RBP eCLIP12.64□□□□□ -0.39
GARNL3-206ENST00000439286 ITGA10O75578 1167 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 CLEC3AO75596 197 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 SEC31AO94979 1220 aaKnown RBP12.64□□□□□ -0.39
GARNL3-206ENST00000439286 S100BP04271 92 aaPredicted RBP12.64□□□□□ -0.39
GARNL3-206ENST00000439286 IFNA16P05015 189 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 SSTR2P30874 369 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 GDF5P43026 501 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 SSR4P51571 173 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 PLA2G16P53816 162 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 RAB38P57729 211 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 GNG11P61952 73 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 HSF1Q00613 529 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 POU4F1Q01851 419 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 SLCO4C1Q6ZQN7 724 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 DOLPP1Q86YN1 238 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 GPSM1Q86YR5 675 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 CEP97Q8IW35 865 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 SULF2Q8IWU5 870 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.64□□□□□ -0.39
GARNL3-206ENST00000439286 ZNF595Q8IYB9 648 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 ZBED8Q8IZ13 594 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 TMEM132CQ8N3T6 1108 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 SNX31Q8N9S9 440 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 PYROXD1Q8WU10 500 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 PHF10Q8WUB8 498 aaKnown RBP12.64□□□□□ -0.39
GARNL3-206ENST00000439286 CHTF18Q8WVB6 975 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 RHBDF1Q96CC6 855 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 MS4A6EQ96DS6 147 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 TRIM51Q9BSJ1 452 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 ROGDIQ9GZN7 287 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 RHOJQ9H4E5 214 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 NT5DC2Q9H857 520 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 DNAJC11Q9NVH1 559 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 MOCS1Q9NZB8 636 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 YARS2Q9Y2Z4 477 aaKnown RBP12.64□□□□□ -0.39
GARNL3-206ENST00000439286 PSAT1Q9Y617 370 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 CLCA3PQ9Y6N3 262 aa12.64□□□□□ -0.39
GARNL3-206ENST00000439286 A0A0G2JN53 185 aa12.63□□□□□ -0.39
GARNL3-206ENST00000439286 LRIT2A6NDA9 550 aa12.63□□□□□ -0.39
GARNL3-206ENST00000439286 A8MVJ9 347 aa12.63□□□□□ -0.39
GARNL3-206ENST00000439286 SNRNP200O75643 2136 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms