RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 B3GALT2O43825 422 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 SLC19A2O60779 497 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 SP1P08047 785 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 TPP2P29144 1249 aaPredicted RBP17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 GP5P40197 560 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 CA7P43166 264 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 CYB561P49447 251 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 ATP6V0D1P61421 351 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 CBLBQ13191 982 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 MAPKAPK3Q16644 382 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 SLC25A25Q6KCM7 469 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 TRIM40Q6P9F5 258 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 GALNTL5Q7Z4T8 443 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 KLHDC8AQ8IYD2 350 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 SPATA4Q8NEY3 305 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 SEC16BQ96JE7 1060 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 RBBP8Q99708 897 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 MCMBPQ9BTE3 642 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 PITHD1Q9GZP4 211 aaPredicted RBP17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 COPS7BQ9H9Q2 264 aaPredicted RBP17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 NECTIN3Q9NQS3 549 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 RNF112Q9ULX5 631 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 MRPS33Q9Y291 106 aaKnown RBP17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 UTP11Q9Y3A2 253 aaKnown RBP17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 MMACHCQ9Y4U1 282 aa17.28■□□□□ 0.36
AC004540.1-201ENST00000439120 IGKV3D-11A0A0A0MRZ8 115 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 TCRBV9S1A1TA0A576 114 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 ARHGAP10A1A4S6 786 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 LRIT2A6NDA9 550 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 CXorf49A8MYA2 514 aaPredicted RBP17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 C4orf51C9J302 202 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 CLDN4O14493 209 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 RAD51CO43502 376 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 CLEC3AO75596 197 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 SLC25A12O75746 678 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 MYO1DO94832 1006 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 ESRRAP11474 423 aaPredicted RBP17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 HSPA7P48741 367 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 C2orf54Q08AI8 447 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 SLC13A2Q13183 592 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 NAA30Q147X3 362 aaPredicted RBP17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 KRTCAP3Q53RY4 240 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 XKR6Q5GH73 641 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 CDKL4Q5MAI5 379 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 SULT1C3Q6IMI6 304 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 C3orf62Q6ZUJ4 267 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 CCDC25Q86WR0 208 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 LURAP1LQ8IV03 231 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 ADAMTS18Q8TE60 1221 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 EXT2Q93063 718 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 MS4A6EQ96DS6 147 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 CCDC120Q96HB5 630 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 PDLIM2Q96JY6 352 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 GPR137Q96N19 417 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 GPR22Q99680 433 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 NPLQ9BXD5 320 aaPredicted RBP17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 REXO4Q9GZR2 422 aaKnown RBP17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 TSPAN10Q9H1Z9 355 aaPredicted RBP17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 NT5DC2Q9H857 520 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 PRTFDC1Q9NRG1 225 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 PNO1Q9NRX1 252 aaKnown RBP17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 ENTPD4Q9Y227 616 aa17.27■□□□□ 0.36
AC004540.1-201ENST00000439120 CRYBG3Q68DQ2 2970 aa17.27■□□□□ 0.35
AC004540.1-201ENST00000439120 TRBV11-1A0A0K0K1C0 115 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 NPIPA5E9PKD4 350 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 HNRNPRO43390 633 aaKnown RBP17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 STK16O75716 305 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 NEURL1O76050 574 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 GSTA2P09210 222 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 CD1DP15813 335 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 CASQ1P31415 396 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 HNRNPH1P31943 449 aaKnown RBP17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 SPRP35270 261 aaPredicted RBP17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 CLCN2P51788 898 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 PLA2G16P53816 162 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 RAB38P57729 211 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 RAB10P61026 200 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 CAV1Q03135 178 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 TGM3Q08188 693 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 RCN2Q14257 317 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 PDK4Q16654 411 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 HIST2H2ACQ16777 129 aaPredicted RBP17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 FBXO48Q5FWF7 155 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 HIST2H2AA3Q6FI13 130 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 RAPH1Q70E73 1250 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 B3GNT7Q8NFL0 401 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 OR2L5Q8NG80 312 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 THAP3Q8WTV1 239 aaPredicted RBP17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 MARVELD3Q96A59 401 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 PTCD3Q96EY7 689 aaKnown RBP17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 FRMD6Q96NE9 622 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 CCDC77Q9BR77 488 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 TMEM79Q9BSE2 394 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 EFCAB11Q9BUY7 163 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 AICDAQ9GZX7 198 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 RAB17Q9H0T7 212 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 EHD1Q9H4M9 534 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 NPIPA1Q9UND3 350 aa17.26■□□□□ 0.35
AC004540.1-201ENST00000439120 CACNA1DQ01668 2161 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms