RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ROS1P08922 2347 aa11.34□□□□□ -0.59
SMAD9-IT1-201ENST00000437983 CCDC162PA2VCL2 907 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 A8MV72 311 aaPredicted RBP11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 HCN1O60741 890 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 OR2J2O76002 312 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 APOA4P06727 396 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 FHP07954 510 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 RFPL3SP0C7P2 107 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 MAOAP21397 527 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 SOX3P41225 446 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 NR2C2P49116 596 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 OLR1P78380 273 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 PRDX1Q06830 199 aaKnown RBP11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 SIX1Q15475 284 aaPredicted RBP11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 GK5Q6ZS86 529 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 VSIG1Q86XK7 387 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 FBXW8Q8N3Y1 598 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 PPFIBP2Q8ND30 876 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 IGFBPL1Q8WX77 278 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ROBO4Q8WZ75 1007 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 PIK3IP1Q96FE7 263 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 PTCHD1Q96NR3 888 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 TBL1YQ9BQ87 522 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 FAM173AQ9BQD7 235 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 RBM24Q9BX46 236 aaKnown RBP11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 REG4Q9BYZ8 158 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 SLC6A15Q9H2J7 730 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 LRTM1Q9HBL6 345 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ANKHQ9HCJ1 492 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 PIH1D1Q9NWS0 290 aaKnown RBP11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 SPATA7Q9P0W8 599 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CTTNBP2NLQ9P2B4 639 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 TRHDEQ9UKU6 1024 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 NCKAP5O14513 1909 aa11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 RAI1Q7Z5J4 1906 aaPredicted RBP11.33□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 A0A087X0T9 212 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 LRRC10BA6NIK2 292 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 H7BY64 318 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CST8O60676 142 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 B3GALT4O96024 378 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 FAM228BP0C875 321 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ERGP11308 486 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 RBL1P28749 1068 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CLCN2P51788 898 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ADARP55265 1226 aaKnown RBP11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ATP5J2P56134 94 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 SEMA3AQ14563 771 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 POU6F1Q14863 301 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 HYAL4Q2M3T9 481 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 WIPI1Q5MNZ9 446 aaPredicted RBP11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 FAM47EQ6ZV65 393 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 BZW1Q7L1Q6 419 aaKnown RBP11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 LUZP2Q86TE4 346 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CCDC50Q8IVM0 306 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 SMPDL3AQ92484 453 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 PRAP1Q96NZ9 151 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 QKIQ96PU8 341 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 OR1F2PQ96R84 312 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CARD6Q9BX69 1037 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ARNT2Q9HBZ2 717 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 NECTIN3Q9NQS3 549 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 LMBRD1Q9NUN5 540 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 YARS2Q9Y2Z4 477 aaKnown RBP11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 TESMINQ9Y4I5 508 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 WIF1Q9Y5W5 379 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 TENM1Q9UKZ4 2725 aa11.32□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 HEATR5AQ86XA9 2040 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 GOLGA6L22H0YM25 854 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 PAX1P15863 534 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CTSSP25774 331 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 GSTT1P30711 240 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 TRPC1P48995 793 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 RELAQ04206 551 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 FOXF2Q12947 444 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 VEZF1Q14119 521 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CLEC12BQ2HXU8 276 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 KCTD11Q693B1 232 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 LACC1Q8IV20 430 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 B3GNT7Q8NFL0 401 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 OR6P1Q8NGX9 317 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 STYXQ8WUJ0 223 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ASB15Q8WXK1 588 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 TBC1D20Q96BZ9 403 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 SCYL1Q96KG9 808 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 SPTLC3Q9NUV7 552 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ZNF701Q9NV72 531 aaPredicted RBP11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 PCDHGB3Q9Y5G1 929 aa11.31□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 TCRBV16S1A1N1A0A5B0 115 aa11.3□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 AHRRA9YTQ3 701 aa11.3□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 WWP2O00308 870 aa11.3□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CHST10O43529 356 aa11.3□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 ZNF354AO60765 605 aaPredicted RBP11.3□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 MYO1DO94832 1006 aa11.3□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 CCL3P10147 92 aa11.3□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 TNNT1P13805 278 aa11.3□□□□□ -0.6
SMAD9-IT1-201ENST00000437983 IL10P22301 178 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms