RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 HAS1Q92839 578 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 DDIT4LQ96D03 193 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM209Q96SK2 561 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 ACSS2Q9NR19 701 aa10.83□□□□□ -0.68
SCN4A-201ENST00000435607 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 A0A1B0GVT2 93 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 FAM155AB1AL88 458 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 LATS1O95835 1130 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF28P17035 718 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 DDCP20711 480 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HERVK_113P63132 956 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 GBE1Q04446 702 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 SLC18A2Q05940 514 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 BLMHQ13867 455 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 CHRNA6Q15825 494 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM69Q5SWH9 247 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 GPR153Q6NV75 609 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 CRELD2Q6UXH1 353 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 PRELID2Q8N945 189 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 GNPDA2Q8TDQ7 276 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ERVK-6Q9BXR3 956 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 S100A14Q9HCY8 104 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 SLAMF7Q9NQ25 335 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 MALT1Q9UDY8 824 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 CARD8Q9Y2G2 431 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 C2orf92A0A1B0GVN3 265 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 BCAS1O75363 584 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 SHBGP04278 402 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 RNH1P13489 461 aaKnown RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ABOP16442 354 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ARL2P36404 184 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 KCNC1P48547 511 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 EPHA4P54764 986 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 RPL26P61254 145 aaKnown RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 DUOXA1Q1HG43 343 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 MARCH9Q86YJ5 346 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 OR56B2PQ8NGI1 322 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 IL31RAQ8NI17 732 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 MSI2Q96DH6 328 aaKnown RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 MVB12BQ9H7P6 319 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 CAPN5O15484 640 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 C4BPAP04003 597 aaKnown RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HNRNPA1P09651 372 aaKnown RBP eCLIP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 MAGEA3P43357 314 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HACD2Q6Y1H2 254 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 SPATC1Q76KD6 591 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ELMOD2Q8IZ81 293 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 GAB3Q8WWW8 586 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 XKR8Q9H6D3 395 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ABCG2Q9UNQ0 655 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 DIP2BQ9P265 1576 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 D6RAR5 112 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HOXA9P31269 272 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM53Q6P2H8 277 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 LNX1Q8TBB1 728 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 FANK1Q8TC84 345 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 LRIG1Q96JA1 1093 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HAO2Q9NYQ3 351 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 TP53TG5Q9Y2B4 290 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 IL3P08700 152 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ENGP17813 658 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ARSFP54793 590 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 SRYQ05066 204 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 TRAM2Q15035 370 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 SMIM15Q7Z3B0 74 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 OR14L1PQ8NHC6 308 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HBEGFQ99075 208 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HSD17B14Q9BPX1 270 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF442Q9H7R0 627 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 DYNLRB1Q9NP97 96 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 DHDHQ9UQ10 334 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 SCML2Q9UQR0 700 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 MAFBQ9Y5Q3 323 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 LOC100509620A0A075B734 347 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 HLA-DPB1P04440 258 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 CCNHP51946 323 aaPredicted RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 FAM69BQ5VUD6 431 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 CARD17Q5XLA6 110 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 FSTL4Q6MZW2 842 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 TRABD2AQ86V40 505 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 LGI4Q8N135 537 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 TBC1D15Q8TC07 691 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 MOV10Q9HCE1 1003 aaKnown RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 COPZ2Q9P299 210 aa10.82□□□□□ -0.68
SCN4A-201ENST00000435607 APOBEC3BQ9UH17 382 aaKnown RBP10.82□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF850A8MQ14 1090 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 CSTAP01040 98 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 DLSTP36957 453 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 FOLR3P41439 243 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 RPS24P62847 133 aaKnown RBP10.81□□□□□ -0.68
SCN4A-201ENST00000435607 NTRK2Q16620 822 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 KCNK18Q7Z418 384 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 ZNF584Q8IVC4 421 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 UBQLNLQ8IYU4 475 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 C1orf127Q8N9H9 656 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 SPTSSAQ969W0 71 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 TMEM109Q9BVC6 243 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 TMED9Q9BVK6 235 aa10.81□□□□□ -0.68
SCN4A-201ENST00000435607 HIF3AQ9Y2N7 669 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms