RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 OPN1SWP03999 348 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 PTX3P26022 381 aaPredicted RBP17.79■□□□□ 0.44
CLK1-205ENST00000434813 MAP2K4P45985 399 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 SLC6A11P48066 632 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 EEF1A2Q05639 463 aaKnown RBP17.79■□□□□ 0.44
CLK1-205ENST00000434813 GAB4Q2WGN9 574 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 TRIM40Q6P9F5 258 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 FAM83HQ6ZRV2 1179 aaPredicted RBP17.79■□□□□ 0.44
CLK1-205ENST00000434813 PRSS48Q7RTY5 328 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 PDZD3Q86UT5 571 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 PARP8Q8N3A8 854 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 SMYD1Q8NB12 490 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 ZNF540Q8NDQ6 660 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 GIPC3Q8TF64 312 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 APH1BQ8WW43 257 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 TAMM41Q96BW9 452 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 YIPF6Q96EC8 236 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 FAM129BQ96TA1 746 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 C1GALT1Q9NS00 363 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 ACSL6Q9UKU0 697 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 CEP290O15078 2479 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 TNFRSF11BO00300 401 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 AXIN1O15169 862 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 PCDHGA12O60330 932 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 NFATC1O95644 943 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 FSHRP23945 695 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 PBX2P40425 430 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 VIPR2P41587 438 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 RANBP1P43487 201 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 RAB15P59190 212 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 SMN1Q16637 294 aaKnown RBP17.79■□□□□ 0.44
CLK1-205ENST00000434813 ZNF630Q2M218 657 aaPredicted RBP17.79■□□□□ 0.44
CLK1-205ENST00000434813 VN1R5Q7Z5H4 357 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 ZBTB46Q86UZ6 589 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 ENTHD1Q8IYW4 607 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 ABHD11Q8NFV4 315 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 OR4C15Q8NGM1 316 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 NFKBIDQ8NI38 313 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 PPP1R14BQ96C90 147 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 RHNO1Q9BSD3 238 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 FAIMQ9NVQ4 179 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 DEC1Q9P2X7 70 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 SPASTQ9UBP0 616 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 TESMINQ9Y4I5 508 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 PCDHGA6Q9Y5G7 932 aa17.79■□□□□ 0.44
CLK1-205ENST00000434813 MAGEB3O15480 346 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 KLK1P06870 262 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 ZNF12P17014 697 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 NR4A1P22736 598 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 KELP23276 732 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 CSNK2BP67870 215 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 RPA4Q13156 261 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 CLCA4Q14CN2 919 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 DUSP6Q16828 381 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 SLC5A12Q1EHB4 618 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 TMIGD1Q6UXZ0 262 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 FAM129CQ86XR2 697 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 DCUN1D3Q8IWE4 304 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 SLC15A4Q8N697 577 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 ZNF740Q8NDX6 193 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 RAD51AP1Q96B01 352 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 IL17FQ96PD4 163 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 ZNF300Q96RE9 604 aaPredicted RBP17.78■□□□□ 0.44
CLK1-205ENST00000434813 TMEM245Q9H330 911 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 ACOT13Q9NPJ3 140 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 NECTIN3Q9NQS3 549 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 DYRK4Q9NR20 520 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 ASF1AQ9Y294 204 aa17.78■□□□□ 0.44
CLK1-205ENST00000434813 MAN1A2O60476 641 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 ZBTB11O95625 1053 aaPredicted RBP17.77■□□□□ 0.44
CLK1-205ENST00000434813 FADS2O95864 444 aaKnown RBP17.77■□□□□ 0.44
CLK1-205ENST00000434813 IL3P08700 152 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 CHI3L1P36222 383 aaPredicted RBP17.77■□□□□ 0.44
CLK1-205ENST00000434813 PRIM2P49643 509 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 CASP9P55211 416 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 CDK6Q00534 326 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 ZNF234Q14588 700 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 CRB2Q5IJ48 1285 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 PPP2R2DQ66LE6 453 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 RNF130Q86XS8 419 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 KRT78Q8N1N4 520 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 OR10G2Q8NGC3 310 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 ABTB1Q969K4 478 aaPredicted RBP17.77■□□□□ 0.44
CLK1-205ENST00000434813 COX14Q96I36 57 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 SFXN1Q9H9B4 322 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 RASSF1Q9NS23 344 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 PCYT1BQ9Y5K3 369 aaPredicted RBP17.77■□□□□ 0.44
CLK1-205ENST00000434813 DGKBQ9Y6T7 804 aa17.77■□□□□ 0.44
CLK1-205ENST00000434813 A0A1W2PRB8 838 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 KRT75O95678 551 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 ARAFP10398 606 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 ERGP11308 486 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 ITGA2P17301 1181 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 ST13P50502 369 aaKnown RBP17.77■□□□□ 0.43
CLK1-205ENST00000434813 PCBP3P57721 371 aaKnown RBP17.77■□□□□ 0.43
CLK1-205ENST00000434813 CYP2A13Q16696 494 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 PRSS53Q2L4Q9 553 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 IER5LQ5T953 404 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 GPR153Q6NV75 609 aa17.77■□□□□ 0.43
CLK1-205ENST00000434813 C16orf87Q6PH81 154 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms