RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 IFI44LQ53G44 452 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF776Q68DI1 518 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ETFRF1Q6IPR1 90 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 CEACAM20Q6UY09 585 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 DLEU7Q6UYE1 221 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 B3GLCTQ6Y288 498 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 C15orf52Q6ZUT6 534 aaKnown RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 CYP4V2Q6ZWL3 525 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 FCRLAQ7L513 359 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 NOTCH2NLQ7Z3S9 236 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 CROCCP3Q8IVE0 287 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 DCUN1D3Q8IWE4 304 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 OR4C15Q8NGM1 316 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 AZIN2Q96A70 460 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 RFT1Q96AA3 541 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF501Q96CX3 271 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 NXPE2Q96DL1 559 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 GUCD1Q96NT3 240 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 UHRF2Q96PU4 802 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 NTMT1Q9BV86 223 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 NAPBQ9H115 298 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 RNF121Q9H920 327 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC52A3Q9NQ40 469 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 PDRG1Q9NUG6 133 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 NINJ2Q9NZG7 142 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 EPHA6Q9UF33 1036 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 C19orf25Q9UFG5 118 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC12A6Q9UHW9 1150 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 PSORS1C1Q9UIG5 152 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 TSPAN16Q9UKR8 245 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 SATB2Q9UPW6 733 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ITM2BQ9Y287 266 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 NSG2Q9Y328 171 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ATP10BO94823 1461 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 MYH15Q9Y2K3 1946 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 JCADQ9P266 1359 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 STRCQ7RTU9 1775 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 RAPGEF2Q9Y4G8 1499 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 A0A087X002 238 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 TRBV4-1A0A0J9YWV2 114 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC28A1O00337 649 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 P2RX6O15547 441 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 EXTL3O43909 919 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 PRPSAP2O60256 369 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 LMX1BO60663 402 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 PRDM1O75626 825 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 NUDT17P0C025 328 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 ODC1P11926 461 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 CEACAM1P13688 526 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 CEBPBP17676 345 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 GAP43P17677 238 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 ITGB6P18564 788 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 CCR4P51679 360 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 LUMP51884 338 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 SMSP52788 366 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 SP3Q02447 781 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 GABPAQ06546 454 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 ABRQ12979 859 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 GAMTQ14353 236 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 MEF2DQ14814 521 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 EFTUD2Q15029 972 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 TAB1Q15750 504 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 DUSP5Q16690 384 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 GTDC1Q4AE62 458 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 STPG1Q5TH74 334 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 KIAA1161Q6NSJ0 714 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 SH2D5Q6ZV89 423 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC26A9Q7LBE3 791 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 TRMT11Q7Z4G4 463 aaKnown RBP2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 LACC1Q8IV20 430 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 STHQ8IWL8 128 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 ELMOD2Q8IZ81 293 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 FBXW8Q8N3Y1 598 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 RNF149Q8NC42 400 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 HAS2Q92819 552 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 CFAP36Q96G28 342 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 SPATA13Q96N96 652 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 NEDD4LQ96PU5 975 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 NODALQ96S42 347 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 RUFY1Q96T51 708 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 NAP1L3Q99457 506 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 SSX3Q99909 188 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 PKP2Q99959 881 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 LRRC2Q9BYS8 371 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 DPEP3Q9H4B8 488 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 RPF1Q9H9Y2 349 aaKnown RBP2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 PIGVQ9NUD9 493 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 UBQLN2Q9UHD9 624 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF580Q9UK33 172 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 PILRAQ9UKJ1 303 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 PIN4Q9Y237 131 aaKnown RBP2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 C2CD2Q9Y426 696 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 LRP12Q9Y561 859 aa2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB1P27-201ENST00000431429 NPHP3Q7Z494 1330 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 STK36Q9NRP7 1315 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 KIAA0556O60303 1618 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 CAMSAP1Q5T5Y3 1602 aa2.73□□□□□ -1.97
HMGB1P27-201ENST00000431429 A0A087WW49 117 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms