RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 FXYD6P3P58550 94 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 RPS3AP61247 264 aaKnown RBP14.87□□□□□ -0.03
PTPRF-206ENST00000429895 SPANXN4Q5MJ08 99 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM110Q86TL2 294 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 OR9I1Q8NGQ6 314 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 TCEAL3Q969E4 200 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 SMOQ99835 787 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM109Q9BVC6 243 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 OR6C70A6NIJ9 312 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 C3orf33Q6P1S2 294 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 Q6ZVL8 140 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 ZC3HC1Q86WB0 502 aaKnown RBP14.87□□□□□ -0.03
PTPRF-206ENST00000429895 SLC44A3Q8N4M1 653 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 TUBGCP5Q96RT8 1024 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 PLATP00750 562 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 ADH7P40394 386 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 STK19P49842 368 aaPredicted RBP14.87□□□□□ -0.03
PTPRF-206ENST00000429895 SLC15A3Q8IY34 581 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 WACQ9BTA9 647 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 CCDC86Q9H6F5 360 aaKnown RBP14.87□□□□□ -0.03
PTPRF-206ENST00000429895 NUDT15Q9NV35 164 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 MROH2AA6NES4 1674 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 ADAM15Q13444 863 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 PLEKHG6Q3KR16 790 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 GALNT10Q86SR1 603 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 LRRC20Q8TCA0 184 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 NSMAFQ92636 917 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 FAXDC2Q96IV6 333 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 NTPCRQ9BSD7 190 aaKnown RBP14.87□□□□□ -0.03
PTPRF-206ENST00000429895 TXNRD2Q9NNW7 524 aa14.87□□□□□ -0.03
PTPRF-206ENST00000429895 IGKV6D-41A0A0C4DH26 115 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 CREG1O75629 220 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 FARS2O95363 451 aaKnown RBP14.86□□□□□ -0.03
PTPRF-206ENST00000429895 GNRHRP30968 328 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 SYNPOQ8N3V7 929 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 OR4K14Q8NGD5 310 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 C9orf43Q8TAL5 461 aaPredicted RBP14.86□□□□□ -0.03
PTPRF-206ENST00000429895 DCSTAMPQ9H295 470 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 DPAGT1Q9H3H5 408 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.86□□□□□ -0.03
PTPRF-206ENST00000429895 AQP12BA6NM10 295 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 RGS19P49795 217 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 ARSKQ6UWY0 536 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 AQP12AQ8IXF9 295 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 ZNF461Q8TAF7 563 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 LRCH3Q96II8 777 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 ZC3H10Q96K80 434 aaKnown RBP14.86□□□□□ -0.03
PTPRF-206ENST00000429895 C12orf42Q96LP6 360 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 DERL2Q9GZP9 239 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 DNAJB4Q9UDY4 337 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 ZFR2Q9UPR6 939 aaKnown RBP14.86□□□□□ -0.03
PTPRF-206ENST00000429895 SPEF1Q9Y4P9 236 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 COCHO43405 550 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 CASP6P55212 293 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 GPR17Q13304 367 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 MPP2Q14168 576 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 SLC36A4Q6YBV0 504 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 TREML1Q86YW5 311 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 DCAF4L2Q8NA75 395 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 LSM14AQ8ND56 463 aaKnown RBP14.86□□□□□ -0.03
PTPRF-206ENST00000429895 OR4C15Q8NGM1 316 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 ASB9Q96DX5 294 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM248Q9NWD8 314 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 SH2B3Q9UQQ2 575 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 RHOP08100 348 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 PFKLP17858 780 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 MLLT6P55198 1093 aaPredicted RBP14.86□□□□□ -0.03
PTPRF-206ENST00000429895 FOXK1P85037 733 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 KCNJ11Q14654 390 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 RUNDC3AQ59EK9 446 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 ERN2Q76MJ5 926 aaKnown RBP14.86□□□□□ -0.03
PTPRF-206ENST00000429895 GNPDA2Q8TDQ7 276 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 RFT1Q96AA3 541 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 PPP1R14BQ96C90 147 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 MCHR1Q99705 422 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 TAS2R9Q9NYW1 312 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 KDM4FA0A1W2PPD8 638 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 GJB5O95377 273 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 OR12D1P0DN82 309 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 RFC2P35250 354 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 GSK3BP49841 420 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 BNIP3Q12983 259 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 CYBRD1Q53TN4 286 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 TMPPEQ6ZT21 453 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 FZD3Q9NPG1 666 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 RDH8Q9NYR8 311 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 GABRQQ9UN88 632 aa14.86□□□□□ -0.03
PTPRF-206ENST00000429895 PROM1O43490 865 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 ARL6IP5O75915 188 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 SHMT2P34897 504 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 ACSBG2Q5FVE4 666 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 C14orf80Q86SX3 495 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 LAS2Q8IYD9 372 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM80Q96HE8 168 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM68Q96MH6 324 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 OR2M4Q96R27 311 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 MAPKAP1Q9BPZ7 522 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 TMEM168Q9H0V1 697 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 PPP4R1LQ9P1A2 415 aa14.85□□□□□ -0.03
PTPRF-206ENST00000429895 DNMT3AQ9Y6K1 912 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms