RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 DHPSP49366 369 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 CLK1P49759 484 aaKnown RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 GALCP54803 685 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 ARPP19P56211 112 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 RPS3AP61247 264 aaKnown RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 TWF1Q12792 350 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 RUNX3Q13761 415 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 EMC2Q15006 297 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 TEAD2Q15562 447 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 UPP1Q16831 310 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 MOXD1Q6UVY6 613 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 GLDNQ6ZMI3 551 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 STXBP4Q6ZWJ1 553 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 LPCAT2Q7L5N7 544 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 CPLX4Q7Z7G2 160 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 TSPAN33Q86UF1 283 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 ITIH5Q86UX2 942 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 EFCAB13Q8IY85 973 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 PDCL2Q8N4E4 241 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 TRIML1Q8N9V2 468 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 APPL2Q8NEU8 664 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 SMPDL3BQ92485 455 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 ZNF653Q96CK0 615 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 LINC00479Q96M42 142 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 FAM20AQ96MK3 541 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 AGAP3Q96P47 875 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 RHNO1Q9BSD3 238 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 CRACR2AQ9BSW2 395 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 EXOC1Q9NV70 894 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 RABL2AQ9UBK7 228 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 CACNG5Q9UF02 275 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 ITM2BQ9Y287 266 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 ASB3Q9Y575 518 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 KALRNO60229 2985 aa4.33□□□□□ -1.72
HMGB3P5-201ENST00000428894 A0A1B0GVC2 190 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 SPAARA0A1B0GVQ0 90 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 OR2M5A3KFT3 312 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 J3QKU1 62 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 PTGESO14684 152 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 ARHGEF9O43307 516 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 CRLF1O75462 422 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 EIF2S1P05198 315 aaKnown RBP4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 STIP1P31948 543 aaKnown RBP4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 RPL9P32969 192 aaKnown RBP4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 MSH2P43246 934 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 KCNJ10P78508 379 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 NUCB1Q02818 461 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 GFPT1Q06210 699 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 CCDC173Q0VFZ6 552 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 WASHC5Q12768 1159 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 PPP2R5CQ13362 524 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 UBE2V1Q13404 147 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 DMC1Q14565 340 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 TTC31Q49AM3 519 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 PCGF5Q86SE9 256 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 ZBTB8OSQ8IWT0 167 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 CCDC65Q8IXS2 484 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 TSTD1Q8NFU3 115 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 OR2T12Q8NG77 320 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 RPLP0P6Q8NHW5 317 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 MIPOL1Q8TD10 442 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 TBCKQ8TEA7 893 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 RFFLQ8WZ73 363 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 TAF4BQ92750 862 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 SEMA4DQ92854 862 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 VMP1Q96GC9 406 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 CCDC43Q96MW1 224 aaKnown RBP4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 OPRPNQ99935 248 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 C2orf40Q9H1Z8 148 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 ERVMER34-1Q9H9K5 563 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 SH3GLB2Q9NR46 395 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 GKN1Q9NS71 199 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 ZDHHC18Q9NUE0 388 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 TRMT1Q9NXH9 659 aaKnown RBP4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 EHD2Q9NZN4 543 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 CACNG4Q9UBN1 327 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 RASAL2Q9UJF2 1139 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 TMCC3Q9ULS5 477 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 ADAMTS9Q9P2N4 1935 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 APC2O95996 2303 aa4.32□□□□□ -1.72
HMGB3P5-201ENST00000428894 CITO14578 2027 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 MYO18BQ8IUG5 2567 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 PTPRBP23467 1997 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 A0A087WV48 116 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 E9PAM4 449 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 AP5Z1O43299 807 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GPR137BO60478 399 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 TMCC2O75069 709 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GCNT3O95395 438 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 SEC24AO95486 1093 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 CLEC3BP05452 202 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 SERPINF2P08697 491 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 TPM1P09493 284 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 SELLP14151 372 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GJA1P17302 382 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ANXA7P20073 488 aaKnown RBP4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 GLRA2P23416 452 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 ITGA3P26006 1051 aa4.31□□□□□ -1.72
HMGB3P5-201ENST00000428894 CHMLP26374 656 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms