RNA–Protein interactions for RNA: ENST00000423479.7

CTCFL-205, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-205ENST00000423479 RNF186Q9NXI6 227 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 ING3Q9NXR8 418 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
CTCFL-205ENST00000423479 HCN4Q9Y3Q4 1203 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 ZFP37Q9Y6Q3 630 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-205ENST00000423479 THSD7BQ9C0I4 1608 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 SHOXO15266 292 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 YY2O15391 372 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 CSO75390 466 aaKnown RBP13.62□□□□□ -0.23
CTCFL-205ENST00000423479 PRAMEF12O95522 483 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 LAMP1P11279 417 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 CCND3P30281 292 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-205ENST00000423479 UQCRC1P31930 480 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 CNR2P34972 360 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 GPC1P35052 558 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 AP2S1P53680 142 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-205ENST00000423479 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
CTCFL-205ENST00000423479 CDONQ4KMG0 1287 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 MRPL10Q7Z7H8 261 aaKnown RBP13.62□□□□□ -0.23
CTCFL-205ENST00000423479 NAGSQ8N159 534 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 OR4M1Q8NGD0 313 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 OR9Q1Q8NGQ5 310 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 CD99L2Q8TCZ2 262 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 VPS35Q96QK1 796 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 CLEC2DQ9UHP7 191 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 PCDHB9Q9Y5E1 797 aa13.62□□□□□ -0.23
CTCFL-205ENST00000423479 ZAR1LA6NP61 321 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 NPIPB8E9PQR5 432 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 WWP2O00308 870 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 CTSHP09668 335 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 CYP2A6P11509 494 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 CBLP22681 906 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 PPIBP23284 216 aaKnown RBP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 SLC6A4P31645 630 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.61□□□□□ -0.235e-7■□□□□ 10.9
CTCFL-205ENST00000423479 LCN1P1Q5VSP4 162 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 FRG2Q64ET8 278 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 AMIGO1Q86WK6 493 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 ZNF557Q8N988 423 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 MSLNLQ96KJ4 702 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 FRG2BQ96QU4 278 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 DUSP26Q9BV47 211 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 POLR2J2Q9GZM3 115 aaKnown RBP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 RACGAP1Q9H0H5 632 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 NDUFB11Q9NX14 153 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 AFF4Q9UHB7 1163 aaKnown RBP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 TRPV2Q9Y5S1 764 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 MEN1O00255 615 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 PCDH17O14917 1159 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 PCDH7O60245 1069 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 ENTPD6O75354 484 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 PSKH1P11801 424 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 POU1F1P28069 291 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 HOXC8P31273 242 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 CDH4P55283 916 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 TAF10Q12962 218 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 HNRNPA0Q13151 305 aaKnown RBP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 PTCHD3Q3KNS1 767 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 DGKKQ5KSL6 1271 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 DDI2Q5TDH0 399 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 LRRC70Q7Z2Q7 622 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 RNF175Q8N4F7 328 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 FAM46DQ8NEK8 389 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 NLGN4YQ8NFZ3 816 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 KLHL6Q8WZ60 621 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 TMEM80Q96HE8 168 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 FUBP3Q96I24 572 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 IL4I1Q96RQ9 567 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 GTPBP2Q9BX10 602 aaKnown RBP13.61□□□□□ -0.23
CTCFL-205ENST00000423479 MCOLN1Q9GZU1 580 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 TMEM39AQ9NV64 488 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 MAT2BQ9NZL9 334 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 SH3BP4Q9P0V3 963 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 HSPB11Q9Y547 144 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 ALG5Q9Y673 324 aa13.61□□□□□ -0.23
CTCFL-205ENST00000423479 C1orf226A1L170 272 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 LEUTXA8MZ59 168 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 J3KTA2 159 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 TEX28O15482 410 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 AP2A2O94973 939 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 LGI1O95970 557 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 IL1AP01583 271 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 SSTR4P31391 388 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 MAP2K3P46734 347 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 TUFMP49411 452 aaKnown RBP13.6□□□□□ -0.23
CTCFL-205ENST00000423479 CRISP1P54107 249 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 FOXD4Q12950 439 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-205ENST00000423479 NFATC2Q13469 925 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 FRMPD2BQ6IN97 320 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 ANGPTL8Q6UXH0 198 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 CLDN22Q8N7P3 220 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 L3MBTL4Q8NA19 623 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 AQP11Q8NBQ7 271 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 VPS37AQ8NEZ2 397 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 KIAA1143Q96AT1 154 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-205ENST00000423479 UROC1Q96N76 676 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 TCF25Q9BQ70 676 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 TRAF4Q9BUZ4 470 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-205ENST00000423479 MND1Q9BWT6 205 aa13.6□□□□□ -0.23
CTCFL-205ENST00000423479 NARFLQ9H6Q4 476 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms