RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 PAGE2BQ5JRK9 111 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 ERAP2Q6P179 960 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 UNC5DQ6UXZ4 953 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 CCDC103Q8IW40 242 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 SLC30A8Q8IWU4 369 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 SLC5A8Q8N695 610 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 KLHL23Q8NBE8 558 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 OR4K1Q8NGD4 311 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 WDR48Q8TAF3 677 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 APOBEC4Q8WW27 367 aaKnown RBP8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 SLC5A11Q8WWX8 675 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 KCNC2Q96PR1 638 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 FEVQ99581 238 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 NEURL2Q9BR09 285 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 COPS4Q9BT78 406 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 ZCCHC2Q9C0B9 1178 aaKnown RBP8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 NXF2Q9GZY0 626 aaKnown RBP8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 RNF208Q9H0X6 261 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 ZNF226Q9NYT6 803 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 SH3BP4Q9P0V3 963 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 RAPGEFL1Q9UHV5 662 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 ICKQ9UPZ9 632 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 ITM2BQ9Y287 266 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 ATP11BQ9Y2G3 1177 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 ZNF451Q9Y4E5 1061 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 TESMINQ9Y4I5 508 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 WNT6Q9Y6F9 365 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 A3GALT2U3KPV4 340 aa8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 KIAA0100Q14667 2235 aaKnown RBP8.36□□□□□ -1.07
TRIM49D1-201ENST00000420869 METTL15A6NJ78 407 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 SERPINB7O75635 380 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 TIMP1P01033 207 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 OPN1SWP03999 348 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 NTRK1P04629 796 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 CYP17A1P05093 508 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 ERGP11308 486 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 CSF2RAP15509 400 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 CD36P16671 472 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 TGM1P22735 817 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 ITGB7P26010 798 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 AQP1P29972 269 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 ALDH4A1P30038 563 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 PBLDP30039 288 aaPredicted RBP8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 LIPAP38571 399 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 ERVFC1P60507 584 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 DPTQ07507 201 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 ITGADQ13349 1161 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 EXOC3L2Q2M3D2 409 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 EGFLAMQ63HQ2 1017 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 GPR153Q6NV75 609 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 NXPE4Q6UWF7 544 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 LCTLQ6UWM7 567 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 Q6ZPB1 254 aaPredicted RBP8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 SLC46A3Q7Z3Q1 461 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 FAM129CQ86XR2 697 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 ZNF547Q8IVP9 402 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 SYTL1Q8IYJ3 562 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 LGI4Q8N135 537 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 DENND6BQ8NEG7 585 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 NFKBIDQ8NI38 313 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 SPPL2AQ8TCT8 520 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 SETD7Q8WTS6 366 aaKnown RBP8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 GEMIN6Q8WXD5 167 aaKnown RBP8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 GGHQ92820 318 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 RPL3LQ92901 407 aaKnown RBP8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 CIDECQ96AQ7 238 aaPredicted RBP8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 ARRDC3Q96B67 414 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 PPCDCQ96CD2 204 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 LGALS12Q96DT0 336 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 PPP1R16AQ96I34 528 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 DPEP2Q9H4A9 486 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 RUBCNLQ9H714 662 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 RASSF1Q9NS23 344 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 RLIMQ9NVW2 624 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 CHCHD3Q9NX63 227 aaKnown RBP8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 SAGE1Q9NXZ1 904 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 TAS2R9Q9NYW1 312 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 KCND3Q9UK17 655 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 SLC27A6Q9Y2P4 619 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 DSPPQ9NZW4 1301 aa8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 ARHGEF17Q96PE2 2063 aaPredicted RBP8.35□□□□□ -1.07
TRIM49D1-201ENST00000420869 CLCA1A8K7I4 914 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 HIDE1A8MVS5 230 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 TOR1BO14657 336 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 ZNF197O14709 1029 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 SLC9A3R1O14745 358 aaPredicted RBP8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 HOXC11O43248 304 aaPredicted RBP8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 SH3BGRLO75368 114 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 SEMA3DO95025 777 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 VIPP01282 170 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 ALOX5P09917 674 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 ITGA2P17301 1181 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 TNFRSF1BP20333 461 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 CDH3P22223 829 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 CRATP43155 626 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 DGKGP49619 791 aa8.34□□□□□ -1.07
TRIM49D1-201ENST00000420869 CDH12P55289 794 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms