RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CHI3L1P36222 383 aaPredicted RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 PTGES3Q15185 160 aaKnown RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 TEAD4Q15561 434 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 TBCEQ15813 527 aaPredicted RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 LEXMQ3ZCV2 418 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 GCNT6Q5T4J0 391 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 AGAP7PQ5VUJ5 663 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 LINC00299Q6ZSB3 139 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 SLC46A3Q7Z3Q1 461 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 CAMKMTQ7Z624 323 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 SLC44A2Q8IWA5 706 aaPredicted RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 TRAM1L1Q8N609 369 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 B3GNT7Q8NFL0 401 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 MAGEB10Q96LZ2 347 aaPredicted RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 FAM129BQ96TA1 746 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 ACAT2Q9BWD1 397 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 ACER3Q9NUN7 267 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 IMPAD1Q9NX62 359 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 UPK1BO75841 260 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 AP2A2O94973 939 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 C1orf105O95561 183 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 CYP2A6P11509 494 aaPredicted RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 SPNP16150 400 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 GABRB1P18505 474 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 CDK6Q00534 326 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 UTS2BQ765I0 119 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 POC5Q8NA72 575 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 STARD8Q92502 1023 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 PPCDCQ96CD2 204 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 ZNF689Q96CS4 500 aaPredicted RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 ABHD8Q96I13 439 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 ZSCAN5AQ9BUG6 496 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 CEP44Q9C0F1 390 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 DUSP12Q9UNI6 340 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 CORO2BQ9UQ03 480 aa13.87□□□□□ -0.19
HDAC9-208ENST00000417496 CFAP20Q9Y6A4 193 aaKnown RBP13.87□□□□□ -0.19
HDAC9-208ENST00000417496 COL4A6Q14031 1691 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 NINQ8N4C6 2090 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PCM1Q15154 2024 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 OBSL1O75147 1896 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 AGAP5A6NIR3 686 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 LILRB3O75022 631 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 GASTP01350 101 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 IGFBP1P08833 259 aaPredicted RBP13.86□□□□□ -0.19
HDAC9-208ENST00000417496 FURINP09958 794 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 HSD3B1P14060 373 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PPIBP23284 216 aaKnown RBP13.86□□□□□ -0.19
HDAC9-208ENST00000417496 HSD3B2P26439 372 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 FEN1P39748 380 aaKnown RBP13.86□□□□□ -0.19
HDAC9-208ENST00000417496 MAGEA8P43361 318 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 RGS6P49758 472 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 TPTEP56180 551 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 DMC1Q14565 340 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 MED22Q15528 200 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 TRIM60Q495X7 471 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 RPS26P11Q5JNZ5 115 aaPredicted RBP13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDAC9-208ENST00000417496 C16orf78Q8WTQ4 265 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 IRF7Q92985 503 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 IL17FQ96PD4 163 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PSD2Q9BQI7 771 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PLAGL1Q9UM63 463 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PRKAB1Q9Y478 270 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 WNT6Q9Y6F9 365 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PLK4O00444 970 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 DPM1O60762 260 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 ELFN1P0C7U0 828 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PRLHRP49683 370 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 CSNK2BP67870 215 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 NOGQ13253 232 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 TEAD2Q15562 447 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 TPRG1LQ5T0D9 272 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 C10orf62Q5T681 223 aaPredicted RBP13.86□□□□□ -0.19
HDAC9-208ENST00000417496 KLHL17Q6TDP4 642 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 TECPR1Q7Z6L1 1165 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 HEATR4Q86WZ0 1026 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 ARMC8Q8IUR7 673 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PARP16Q8N5Y8 322 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 KIAA1958Q8N8K9 716 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 AQP11Q8NBQ7 271 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 OR52N2Q8NGI0 321 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 FOPNLQ96NB1 174 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 IL4I1Q96RQ9 567 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 RSPO3Q9BXY4 272 aaPredicted RBP13.86□□□□□ -0.19
HDAC9-208ENST00000417496 BHLHE41Q9C0J9 482 aaPredicted RBP13.86□□□□□ -0.19
HDAC9-208ENST00000417496 ABCG4Q9H172 646 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 OR2AG1Q9H205 316 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 MMP27Q9H306 513 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 ASAH2Q9NR71 780 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PLCXD1Q9NUJ7 323 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 FKBP14Q9NWM8 211 aa13.86□□□□□ -0.19
HDAC9-208ENST00000417496 PIPSLA2A3N6 862 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 MRPS14O60783 128 aaKnown RBP13.85□□□□□ -0.19
HDAC9-208ENST00000417496 DLGAP3O95886 979 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 RPLP0P05388 317 aaKnown RBP13.85□□□□□ -0.19
HDAC9-208ENST00000417496 ALOX5P09917 674 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 ANXA8P13928 327 aa13.85□□□□□ -0.19
HDAC9-208ENST00000417496 SYN1P17600 705 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms