RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DCTP40126 519 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 CD96P40200 585 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 SLC12A2P55011 1212 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 AP2B1P63010 937 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 ADPRMQ3LIE5 342 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF766Q5HY98 468 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 C1QL3Q5VWW1 255 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 C3orf62Q6ZUJ4 267 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 MAATS1Q7Z4T9 603 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 CCDC25Q86WR0 208 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF227Q86WZ6 799 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 SCUBE1Q8IWY4 988 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 TBC1D19Q8N5T2 526 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 PPM1NQ8N819 430 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 GAL3ST3Q96A11 431 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 SCMH1Q96GD3 660 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF354BQ96LW1 612 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 PTCHD1Q96NR3 888 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 CSF3RQ99062 836 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 PHACTR1Q9C0D0 580 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 DNAJC11Q9NVH1 559 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF223Q9UK11 482 aaPredicted RBP14.15□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF490Q9ULM2 529 aaPredicted RBP14.15□□□□□ -0.14
UBXN4-203ENST00000416538 ZNF407Q9C0G0 2248 aa14.15□□□□□ -0.14
UBXN4-203ENST00000416538 HMX2A2RU54 273 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 LRIT2A6NDA9 550 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 ERI3O43414 337 aaKnown RBP14.14□□□□□ -0.15
UBXN4-203ENST00000416538 PRMT3O60678 531 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 NEURL1O76050 574 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 RASAL1O95294 804 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 CERS1P27544 350 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 CASQ1P31415 396 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 RAB10P61026 200 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 BTN3A2P78410 334 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 GUCY2DQ02846 1103 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 OR1C1Q15619 314 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 MEP1AQ16819 746 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 SPINK14Q6IE38 97 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 TMIGD1Q6UXZ0 262 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 CYS1Q717R9 158 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 FJX1Q86VR8 437 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 GPSM1Q86YR5 675 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 CTAGE3PQ8IX95 158 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 FBF1Q8TES7 1133 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 CDKL2Q92772 493 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 KIAA1191Q96A73 305 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 WDR34Q96EX3 536 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 TSPAN17Q96FV3 270 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 ATOH8Q96SQ7 321 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 KLHL1Q9NR64 748 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 IGSF5Q9NSI5 407 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 ZDHHC18Q9NUE0 388 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 GPRC5BQ9NZH0 403 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 TEKT2Q9UIF3 430 aa14.14□□□□□ -0.15
UBXN4-203ENST00000416538 PTBP2Q9UKA9 531 aaKnown RBP14.14□□□□□ -0.15
UBXN4-203ENST00000416538 DNAJC13O75165 2243 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 A8MUA0 341 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 UNC5CO95185 931 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 TPP2P29144 1249 aaPredicted RBP14.13□□□□□ -0.15
UBXN4-203ENST00000416538 MAGEA4P43358 317 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 ATP6V0D1P61421 351 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 SKP1P63208 163 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 IRF9Q00978 393 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 SLC7A5Q01650 507 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 ACTN3Q08043 901 aaPredicted RBP14.13□□□□□ -0.15
UBXN4-203ENST00000416538 BMPR2Q13873 1038 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 DOC2AQ14183 400 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 E2F2Q14209 437 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 SLMAPQ14BN4 828 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 GFRALQ6UXV0 394 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 ISCA2Q86U28 154 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 CENPLQ8N0S6 344 aaPredicted RBP14.13□□□□□ -0.15
UBXN4-203ENST00000416538 CYP4X1Q8N118 509 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 SNX31Q8N9S9 440 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 FAM47BQ8NA70 645 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 APCDD1LQ8NCL9 501 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 CCT6BQ92526 530 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 FRMD6Q96NE9 622 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 TSPAN10Q9H1Z9 355 aaPredicted RBP14.13□□□□□ -0.15
UBXN4-203ENST00000416538 EHD1Q9H4M9 534 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 CDCP1Q9H5V8 836 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 ALG9Q9H6U8 611 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 PRDM9Q9NQV7 894 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 CELSR2Q9HCU4 2923 aa14.13□□□□□ -0.15
UBXN4-203ENST00000416538 PKDREJQ9NTG1 2253 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 ASPDHA6ND91 283 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 UBXN8O00124 270 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 ZNHIT1O43257 154 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 CLEC3AO75596 197 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 STK16O75716 305 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 GSTA2P09210 222 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 MTHFD2P13995 350 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 TFEBP19484 476 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 PLA2G16P53816 162 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 STXBP1P61764 594 aaKnown RBP14.12□□□□□ -0.15
UBXN4-203ENST00000416538 ZRSR2Q15696 482 aaKnown RBP14.12□□□□□ -0.15
UBXN4-203ENST00000416538 PDK4Q16654 411 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 SULT1C3Q6IMI6 304 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 NIPAL1Q6NVV3 410 aa14.12□□□□□ -0.15
UBXN4-203ENST00000416538 ZNF793Q6ZN11 406 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms