RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 IMPA1P29218 277 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 BMPR1AP36894 532 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 XCR1P46094 333 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 LIMS1P48059 325 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 DEFA1P59665 94 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 DEFA3P59666 94 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 CDC42P60953 191 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 RBBP4Q09028 425 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 LRRC74AQ0VAA2 488 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 GANABQ14697 944 aaKnown RBP17.26■□□□□ 0.35
SCARB1-203ENST00000415380 CCDC80Q76M96 950 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 HSD11B1LQ7Z5J1 315 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 IL17RDQ8NFM7 739 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 CIDECQ96AQ7 238 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-203ENST00000415380 LMLNQ96KR4 655 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 TMEM121BQ9BXQ6 578 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-203ENST00000415380 FAM83DQ9H4H8 585 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 C1GALT1Q9NS00 363 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 HCN4Q9Y3Q4 1203 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 INSL5Q9Y5Q6 135 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 SNX8Q9Y5X2 465 aa17.26■□□□□ 0.35
SCARB1-203ENST00000415380 EFCAB10A6NFE3 127 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 CTDSP2O14595 271 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 HLA-FP30511 346 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 MC1RQ01726 317 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 EEF1A2Q05639 463 aaKnown RBP17.25■□□□□ 0.35
SCARB1-203ENST00000415380 ELOAQ14241 798 aaKnown RBP17.25■□□□□ 0.35
SCARB1-203ENST00000415380 SYTL3Q4VX76 610 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 CAPSLQ8WWF8 208 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 CXorf40BQ96DE9 158 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 ZNF486Q96H40 463 aaPredicted RBP17.25■□□□□ 0.35
SCARB1-203ENST00000415380 YME1L1Q96TA2 773 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 PKP4Q99569 1192 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 OGDHLQ9ULD0 1010 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 MAP4K5Q9Y4K4 846 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 CASP8AP2Q9UKL3 1982 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 CCNB2O95067 398 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 POP4O95707 220 aaKnown RBP17.25■□□□□ 0.35
SCARB1-203ENST00000415380 SOD2P04179 222 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 CBLP22681 906 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 CDK6Q00534 326 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 PCDH1Q08174 1060 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 KLHDC8AQ8IYD2 350 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 OR56A3Q8NH54 315 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 OR5AK3PQ8NH89 298 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 GEMIN6Q8WXD5 167 aaKnown RBP17.25■□□□□ 0.35
SCARB1-203ENST00000415380 NEIL2Q969S2 332 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 TMEM38AQ9H6F2 299 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 MOV10Q9HCE1 1003 aaKnown RBP17.25■□□□□ 0.35
SCARB1-203ENST00000415380 TRIM39Q9HCM9 518 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 C14orf119Q9NWQ9 140 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 FTSJ1Q9UET6 329 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 CFL2Q9Y281 166 aa17.25■□□□□ 0.35
SCARB1-203ENST00000415380 LOC110117498-PIK3R3F6TDL0 507 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 CCRL2O00421 344 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 ARHGAP33O14559 1287 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 TSPAN6O43657 245 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 AP2A2O94973 939 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 GADD45GO95257 159 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 ZNF763Q0D2J5 394 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 SSX1Q16384 188 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 MPEG1Q2M385 716 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 Q6ZVL8 140 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 TMPRSS11BQ86T26 416 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 RNF130Q86XS8 419 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 AQP11Q8NBQ7 271 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCARB1-203ENST00000415380 PIK3R3Q92569 461 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 MAPKAP1Q9BPZ7 522 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 TSEN34Q9BSV6 310 aaKnown RBP17.24■□□□□ 0.35
SCARB1-203ENST00000415380 EMILIN2Q9BXX0 1053 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 MRPL17Q9NRX2 175 aaKnown RBP17.24■□□□□ 0.35
SCARB1-203ENST00000415380 ERVK13-1Q9NX77 482 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 CNOT2Q9NZN8 540 aaKnown RBP17.24■□□□□ 0.35
SCARB1-203ENST00000415380 RHCGQ9UBD6 479 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 SH3D21A4FU49 640 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 ZAR1LA6NP61 321 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 GASTP01350 101 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 APOA1P02647 267 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 HMGA2P52926 109 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 TIMM50Q3ZCQ8 353 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 CRB2Q5IJ48 1285 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 MED27Q6P2C8 311 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 KLHL17Q6TDP4 642 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 SLCO4C1Q6ZQN7 724 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 Q6ZVU0 165 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 PTCHD4Q6ZW05 846 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 RAVER1Q8IY67 606 aaKnown RBP17.24■□□□□ 0.35
SCARB1-203ENST00000415380 OXR1Q8N573 874 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 WDR36Q8NI36 951 aaKnown RBP17.24■□□□□ 0.35
SCARB1-203ENST00000415380 AUTS2Q8WXX7 1259 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 TMEM159Q96B96 161 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 SLX1AQ9BQ83 275 aa17.24■□□□□ 0.35
SCARB1-203ENST00000415380 FADS2P1A8MWK0 482 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 SAP18O00422 153 aaKnown RBP17.23■□□□□ 0.35
SCARB1-203ENST00000415380 NPC1O15118 1278 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 GPX5O75715 221 aa17.23■□□□□ 0.35
SCARB1-203ENST00000415380 CATP04040 527 aaKnown RBP17.23■□□□□ 0.35
SCARB1-203ENST00000415380 TCEA1P23193 301 aaKnown RBP17.23■□□□□ 0.35
SCARB1-203ENST00000415380 CHMP24386 653 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms