RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 FHP07954 510 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 HSD3B1P14060 373 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 HSD3B2P26439 372 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 SERPINB5P36952 375 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 SSR2P43308 183 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 PLA2G16P53816 162 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 POLE2P56282 527 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 MAT1AQ00266 395 aaKnown RBP13.84□□□□□ -0.19
LIMS1-206ENST00000414829 ATP1A4Q13733 1029 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 AP5B1Q2VPB7 878 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 MFSD4BQ5TF39 518 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 IRAK1BP1Q5VVH5 260 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 ABHD17CQ6PCB6 329 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 FRMD7Q6ZUT3 714 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 PRSS41Q7RTY9 318 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 VN1R5Q7Z5H4 357 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 CCNYL1Q8N7R7 359 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 OR4F6Q8NGB9 312 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 TRPC4APQ8TEL6 797 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 EXTL1Q92935 676 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 RGMAQ96B86 450 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 ING2Q9H160 280 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 BRF2Q9HAW0 419 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 LYRM4Q9HD34 91 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 RIC8BQ9NVN3 520 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 OXSMQ9NWU1 459 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 P4HTMQ9NXG6 502 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 MS4A12Q9NXJ0 267 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 AHSPQ9NZD4 102 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 RNF11Q9Y3C5 154 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 LAMA5O15230 3695 aa13.84□□□□□ -0.19
LIMS1-206ENST00000414829 A0A1W2PQ72 361 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 ZNF860A6NHJ4 632 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 EIF4E1BA6NMX2 242 aaKnown RBP13.83□□□□□ -0.2
LIMS1-206ENST00000414829 CLDN4O14493 209 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 TRIM13O60858 407 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 CRCPO75575 148 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 SCELO95171 688 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 ESRRBO95718 433 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 ALPPP05187 535 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 C8orf89P0DMQ9 161 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 HMOX2P30519 316 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 CDH13P55290 713 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 AIMP2Q13155 320 aaKnown RBP13.83□□□□□ -0.2
LIMS1-206ENST00000414829 UNC50Q53HI1 259 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 VWA2Q5GFL6 755 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 DEPDC1Q5TB30 811 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 ATP1A1-AS1Q5TC04 95 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 LETMD1Q6P1Q0 360 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 PAGE2Q7Z2X7 111 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 PPP1R32Q7Z5V6 425 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 PRSS58Q8IYP2 241 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 DTWD1Q8N5C7 304 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 GBP7Q8N8V2 638 aaPredicted RBP13.83□□□□□ -0.2
LIMS1-206ENST00000414829 WDR20Q8TBZ3 569 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 QRFPRQ96P65 431 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 FAM111AQ96PZ2 611 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 CDK15Q96Q40 435 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 MTERF1Q99551 399 aaKnown RBP13.83□□□□□ -0.2
LIMS1-206ENST00000414829 MMACHCQ9Y4U1 282 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 HS3ST3B1Q9Y662 390 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 HEATR5BQ9P2D3 2071 aa13.83□□□□□ -0.2
LIMS1-206ENST00000414829 PCM1Q15154 2024 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 ARGFXA6NJG6 315 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 MAGEB17A8MXT2 336 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 CHST10O43529 356 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 ALOX12BO75342 701 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 ZWINTO95229 277 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 HPP00738 406 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 TGFB1P01137 390 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 FURINP09958 794 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 ICAM2P13598 275 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 HIST1H1TP22492 207 aaPredicted RBP13.82□□□□□ -0.2
LIMS1-206ENST00000414829 NAGLUP54802 743 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 RAB38P57729 211 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 CSTF3Q12996 717 aaKnown RBP13.82□□□□□ -0.2
LIMS1-206ENST00000414829 KCNAB2Q13303 367 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 CASP8Q14790 479 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 SYT16Q17RD7 645 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 DCAF10Q5QP82 559 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 QSOX2Q6ZRP7 698 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 SHISA6Q6ZSJ9 500 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 NUDT13Q86X67 352 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 HPS6Q86YV9 775 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 KIRREL3Q8IZU9 778 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 ZCCHC7Q8N3Z6 543 aaKnown RBP13.82□□□□□ -0.2
LIMS1-206ENST00000414829 TCP10LQ8TDR4 215 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 SELENOMQ8WWX9 145 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 PEX11GQ96HA9 241 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 F2RL3Q96RI0 385 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 VN1R1Q9GZP7 353 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 GSTO2Q9H4Y5 243 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 KLHL31Q9H511 634 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 EML4Q9HC35 981 aaKnown RBP13.82□□□□□ -0.2
LIMS1-206ENST00000414829 ATP13A2Q9NQ11 1180 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 RRAGDQ9NQL2 400 aaPredicted RBP13.82□□□□□ -0.2
LIMS1-206ENST00000414829 LYARQ9NX58 379 aaKnown RBP13.82□□□□□ -0.2
LIMS1-206ENST00000414829 PHF11Q9UIL8 331 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 FBXL4Q9UKA2 621 aa13.82□□□□□ -0.2
LIMS1-206ENST00000414829 PCDHGB7Q9Y5F8 929 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms