RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ZWILCHQ9H900 591 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 TEX10Q9NXF1 929 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 LNPEPQ9UIQ6 1025 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 NOCTQ9UK39 431 aaKnown RBP3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 GPRASP1Q5JY77 1395 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 SPATA31D1Q6ZQQ2 1576 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 SHPRHQ149N8 1683 aa3.2□□□□□ -1.9
HMGB1P11-201ENST00000413899 SCAPERQ9BY12 1400 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 YEATS2Q9ULM3 1422 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 UBR1Q8IWV7 1749 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 GREB1LQ9C091 1923 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 A8MVM7 634 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 EPM2AB3EWF7 344 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 PI4K2BG5E9Z4 385 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 H3BMM5 538 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 K7EQD1 137 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 RNF103O00237 685 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 SOCS3O14543 225 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 TLX2O43763 284 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 HSP90AB1P08238 724 aaKnown RBP3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 SP9P0CG40 484 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 KRT5P13647 590 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 OR3A1P47881 315 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 GRB14Q14449 540 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 PPA1Q15181 289 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 FAM106AQ4KMX7 169 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 C11orf88Q6PI97 169 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 C3P1Q6ZMU1 363 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 CHMP1BQ7LBR1 199 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 PIGWQ7Z7B1 504 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 SLC22A15Q8IZD6 547 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 TCEANCQ8N8B7 351 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 NHLRC2Q8NBF2 726 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 GOT1L1Q8NHS2 421 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 AFAP1L1Q8TED9 768 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 TAF15Q92804 592 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 C18orf12Q96KH6 178 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 PARK7Q99497 189 aaKnown RBP3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 ATG101Q9BSB4 218 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 CABLES2Q9BTV7 478 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 C5orf66Q9H5L9 145 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 DNAJB9Q9UBS3 223 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 LEF1Q9UJU2 399 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 COLEC10Q9Y6Z7 277 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 C3P01024 1663 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 NOS1P29475 1434 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 NPATQ14207 1427 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 NEDD4P46934 1319 aa3.19□□□□□ -1.9
HMGB1P11-201ENST00000413899 RIMS1Q86UR5 1692 aaKnown RBP3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 TOPAZ1Q8N9V7 1692 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 NUP155O75694 1391 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 DHX29Q7Z478 1369 aaKnown RBP3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 CCDC7Q96M83 1385 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 hCG_38984A0A1B0GV85 526 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANTXRLA6NF34 631 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 SDR42E2A6NKP2 422 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 KBTBD13C9JR72 458 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 H0Y626 953 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 PSMA7O14818 248 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 STX6O43752 255 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 SCO2O43819 266 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 IDH3BO43837 385 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 NXPH4O95158 308 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 SUPT20HL2P0C7V6 817 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 DLATP10515 647 aaKnown RBP3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 NPBWR1P48145 328 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 MEP1BQ16820 701 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 TYSND1Q2T9J0 566 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 TAF1BQ53T94 588 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 CASC4Q6P4E1 433 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 SHQ1Q6PI26 577 aaKnown RBP3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 NHLRC1Q6VVB1 395 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 MACC1Q6ZN28 852 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 C15orf52Q6ZUT6 534 aaKnown RBP3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 STXBP4Q6ZWJ1 553 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 C5orf24Q7Z6I8 188 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANKRD23Q86SG2 305 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 ANKRD46Q86W74 232 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 ZFAND4Q86XD8 727 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 TEX26Q8N6G2 289 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 CCDC185Q8N715 623 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 UXS1Q8NBZ7 420 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 CCDC114Q96M63 670 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 PRICKLE1Q96MT3 831 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 AGAP4Q96P64 663 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 NEDD4LQ96PU5 975 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 LGMNQ99538 433 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 IL12RB2Q99665 862 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 NACAP1Q9BZK3 213 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 RPF1Q9H9Y2 349 aaKnown RBP3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 TUFT1Q9NNX1 390 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 B3GAT2Q9NPZ5 323 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 GPR173Q9NS66 373 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 VPS18Q9P253 973 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 THEGQ9P2T0 379 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 POLKQ9UBT6 870 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 KIF20BQ96Q89 1820 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 TULP4Q9NRJ4 1543 aa3.18□□□□□ -1.9
HMGB1P11-201ENST00000413899 CD109Q6YHK3 1445 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms