RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 HMGCS1Q01581 520 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 CUL3Q13618 768 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 DSG2Q14126 1118 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 UGT3A2Q3SY77 523 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 ATG16L1Q676U5 607 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 ZNF793Q6ZN11 406 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 TRIM42Q8IWZ5 723 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 QRFPRQ96P65 431 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 KCNC2Q96PR1 638 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 SERPINI1Q99574 410 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 MRPL1Q9BYD6 325 aaKnown RBP28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 TUBB1Q9H4B7 451 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 BRF2Q9HAW0 419 aa28.97■■■□□ 2.23
CSNK1E-206ENST00000413574 TERTO14746 1132 aaKnown RBP28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 CNOT3O75175 753 aaKnown RBP28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 ONECUT2O95948 504 aa28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 CERS1P27544 350 aa28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 RAP1GDS1P52306 607 aa28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 PROSER1Q86XN7 944 aa28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 RAB3IL1Q8TBN0 382 aa28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 RGMAQ96B86 450 aa28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 TRPC4Q9UBN4 977 aa28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 RAP2CQ9Y3L5 183 aa28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 URB1O60287 2271 aaKnown RBP28.96■■■□□ 2.23
CSNK1E-206ENST00000413574 LIFP15018 202 aa28.95■■■□□ 2.23
CSNK1E-206ENST00000413574 OVCH1Q7RTY7 1134 aa28.95■■■□□ 2.23
CSNK1E-206ENST00000413574 ENDOVQ8N8Q3 282 aaKnown RBP28.95■■■□□ 2.23
CSNK1E-206ENST00000413574 ZNF717Q9BY31 904 aaPredicted RBP28.95■■■□□ 2.23
CSNK1E-206ENST00000413574 ILKAPQ9H0C8 392 aaPredicted RBP28.95■■■□□ 2.23
CSNK1E-206ENST00000413574 THAP1Q9NVV9 213 aa28.95■■■□□ 2.23
CSNK1E-206ENST00000413574 IL17BQ9UHF5 180 aa28.95■■■□□ 2.23
CSNK1E-206ENST00000413574 MRPS18BQ9Y676 258 aaKnown RBP28.95■■■□□ 2.23
CSNK1E-206ENST00000413574 RPS18P62269 152 aaKnown RBP28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 TGM3Q08188 693 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 CSTF3Q12996 717 aaKnown RBP28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 DNASE1L3Q13609 305 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 NCF4Q15080 339 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 OR4C11Q6IEV9 310 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 MRPL14Q6P1L8 145 aaKnown RBP28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 SRFBP1Q8NEF9 429 aaKnown RBP28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 TWIST2Q8WVJ9 160 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 CENPKQ9BS16 269 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 TBCDQ9BTW9 1192 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 GPN2Q9H9Y4 310 aaPredicted RBP28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 PNPOQ9NVS9 261 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 GPN3Q9UHW5 284 aaPredicted RBP28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 C9J4A7 227 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 PIM1P11309 404 aaPredicted RBP28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 SSR2P43308 183 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 RUNX2Q13950 521 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 AP5B1Q2VPB7 878 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 VWA2Q5GFL6 755 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 OR51Q1Q8NH59 317 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 COPS7BQ9H9Q2 264 aaPredicted RBP28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 VPS29Q9UBQ0 182 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 MAP4K5Q9Y4K4 846 aa28.94■■■□□ 2.22
CSNK1E-206ENST00000413574 KLF11O14901 512 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 LINC00032P0C843 101 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 HSD3B1P14060 373 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 ATP5A1P25705 553 aaKnown RBP28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 HSD3B2P26439 372 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 BSGP35613 385 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 MTTPP55157 894 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 TBL3Q12788 808 aaKnown RBP28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 SHISA6Q6ZSJ9 500 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 PRSS58Q8IYP2 241 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 GBP7Q8N8V2 638 aaPredicted RBP28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 ACOT4Q8N9L9 421 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 LRRC8CQ8TDW0 803 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 DPH1Q9BZG8 443 aa28.93■■■□□ 2.22
CSNK1E-206ENST00000413574 ANKRD11Q6UB99 2663 aaPredicted RBP28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 SERTM1A2A2V5 107 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 PIP5K1BO14986 540 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 CHST10O43529 356 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 EEDO75530 441 aaKnown RBP28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 SKAP2O75563 359 aaPredicted RBP28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 CHEK2O96017 543 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 GBAP04062 536 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 WT1P19544 449 aaPredicted RBP28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 HIST1H1TP22492 207 aaPredicted RBP28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 OCRLQ01968 901 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 BTKQ06187 659 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 ZNF33BQ06732 778 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 NKG7Q16617 165 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 TRIM46Q7Z4K8 759 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 SPACA3Q8IXA5 215 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 DDIASQ8IXT1 998 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 CKAP2Q8WWK9 683 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 PEX11GQ96HA9 241 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 SERINC2Q96SA4 455 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 RBCK1Q9BYM8 510 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 ZNF282Q9UDV7 671 aaPredicted RBP28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 HAO1Q9UJM8 370 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 FARSAQ9Y285 508 aaKnown RBP28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 EPB41L3Q9Y2J2 1087 aaPredicted RBP28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 ZZEF1O43149 2961 aa28.92■■■□□ 2.22
CSNK1E-206ENST00000413574 B3GALT2O43825 422 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 JRKO75564 520 aa28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 JUNP05412 331 aaKnown RBP28.91■■■□□ 2.22
CSNK1E-206ENST00000413574 RPL14P50914 215 aaKnown RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms