RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 DUSP16Q9BY84 665 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 ARL6Q9H0F7 186 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 FXYD6Q9H0Q3 95 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 METTL17Q9H7H0 456 aaPredicted RBP13.51□□□□□ -0.25
DUSP28-202ENST00000405954 PHF11Q9UIL8 331 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 ERVW-1Q9UQF0 538 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 ERVK-19Q9WJR5 959 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 PCDHGB3Q9Y5G1 929 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 NUP205Q92621 2012 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 GLYATL1P3A0A0U1RQE8 302 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 CCNDBP1O95273 360 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 CFDP00746 253 aaPredicted RBP13.51□□□□□ -0.25
DUSP28-202ENST00000405954 FGF4P08620 206 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 P2RY14Q15391 338 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 SF3A2Q15428 464 aaKnown RBP13.51□□□□□ -0.25
DUSP28-202ENST00000405954 RFTN2Q52LD8 501 aaPredicted RBP13.51□□□□□ -0.25
DUSP28-202ENST00000405954 KDM4DQ6B0I6 523 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 KIAA0930Q6ICG6 404 aaPredicted RBP13.51□□□□□ -0.25
DUSP28-202ENST00000405954 XRRA1Q6P2D8 792 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 PAQR3Q6TCH7 311 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 PDZD9Q8IXQ8 264 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 KRT78Q8N1N4 520 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 OR52B6Q8NGF0 335 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 L3HYPDHQ96EM0 354 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 OPALINQ96PE5 141 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 ZNF112Q9UJU3 913 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 AKT3Q9Y243 479 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 PCDHGA6Q9Y5G7 932 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 ECI2O75521 394 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 VLDLRP98155 873 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 BCL2L1Q07817 233 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 TTLL4Q14679 1199 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 PTPRRQ15256 657 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 SLC25A52Q3SY17 297 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 FRMPD2BQ6IN97 320 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.25
DUSP28-202ENST00000405954 ZC3H10Q96K80 434 aaKnown RBP13.51□□□□□ -0.25
DUSP28-202ENST00000405954 PFDN5Q99471 154 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 ACTR6Q9GZN1 396 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 SAP130Q9H0E3 1048 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 LIPT1Q9Y234 373 aa13.51□□□□□ -0.25
DUSP28-202ENST00000405954 ADRA1BP35368 520 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 OR1E2P47887 323 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 HOXA1P49639 335 aaPredicted RBP13.5□□□□□ -0.25
DUSP28-202ENST00000405954 HK3P52790 923 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 LAMTOR4Q0VGL1 99 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 BAMBIQ13145 260 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 KCNC3Q14003 757 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 ABHD15Q6UXT9 468 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 DNAJB7Q7Z6W7 309 aaPredicted RBP13.5□□□□□ -0.25
DUSP28-202ENST00000405954 SLC5A8Q8N695 610 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 GATAD2BQ8WXI9 593 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 ING5Q8WYH8 240 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 ATOH1Q92858 354 aaPredicted RBP13.5□□□□□ -0.25
DUSP28-202ENST00000405954 WNT8BQ93098 351 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 TADA1Q96BN2 335 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 TREX2Q9BQ50 279 aaPredicted RBP13.5□□□□□ -0.25
DUSP28-202ENST00000405954 QRSL1Q9H0R6 528 aaKnown RBP13.5□□□□□ -0.25
DUSP28-202ENST00000405954 GLOD4Q9HC38 313 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 SRRDQ9UH36 339 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 LRRC72A6NJI9 287 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 SH3BGRLO75368 114 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 SOX14O95416 240 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 LALBAP00709 142 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 RLN2P04090 185 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 RETP07949 1114 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 HLA-EP13747 358 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 HLA-FP30511 346 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 PPP3R1P63098 170 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 GANABQ14697 944 aaKnown RBP13.5□□□□□ -0.25
DUSP28-202ENST00000405954 SUPT20HL1Q3ZLR7 823 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 ARMCX2Q7L311 632 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 TMEM151BQ8IW70 566 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 RBFAQ8N0V3 343 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 ZNF614Q8N883 585 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 RHBDF1Q96CC6 855 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 DPH2Q9BQC3 489 aaPredicted RBP13.5□□□□□ -0.25
DUSP28-202ENST00000405954 KLHL31Q9H511 634 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 LDAHQ9H6V9 325 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 MINDY3Q9H8M7 445 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 ERAP1Q9NZ08 941 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 RCOR3Q9P2K3 495 aaPredicted RBP13.5□□□□□ -0.25
DUSP28-202ENST00000405954 SIX4Q9UIU6 781 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 EVPLQ92817 2033 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 THSD7AQ9UPZ6 1657 aa13.5□□□□□ -0.25
DUSP28-202ENST00000405954 MUSKO15146 869 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 ULK1O75385 1050 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 ESR1P03372 595 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 TNFRSF1BP20333 461 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 FEN1P39748 380 aaKnown RBP13.49□□□□□ -0.25
DUSP28-202ENST00000405954 FAM171A1Q5VUB5 890 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 GPR155Q7Z3F1 870 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 DPP10Q8N608 796 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 GTF3C2Q8WUA4 911 aaPredicted RBP13.49□□□□□ -0.25
DUSP28-202ENST00000405954 CXorf58Q96LI9 332 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 UROC1Q96N76 676 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 ZNF599Q96NL3 588 aa13.49□□□□□ -0.25
DUSP28-202ENST00000405954 NUSAP1Q9BXS6 441 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms