RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 GNB1P62873 340 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 CX3CL1P78423 397 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 NTHL1P78549 312 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 POU5F1Q01860 360 aaKnown RBP3.17□□□□□ -1.9
RPA3-203ENST00000401447 ITGA9Q13797 1035 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 NTRK2Q16620 822 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 MEA1Q16626 185 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 C15orf59Q2T9L4 293 aaPredicted RBP3.17□□□□□ -1.9
RPA3-203ENST00000401447 USH1GQ495M9 461 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 SBK1Q52WX2 424 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 SPDYCQ5MJ68 293 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 LIN9Q5TKA1 542 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 KRT79Q5XKE5 535 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 FAM53AQ6NSI3 398 aaPredicted RBP3.17□□□□□ -1.9
RPA3-203ENST00000401447 RABEPKQ7Z6M1 372 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 LDB1Q86U70 411 aaPredicted RBP3.17□□□□□ -1.9
RPA3-203ENST00000401447 AACSQ86V21 672 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 RALGPS2Q86X27 583 aaPredicted RBP3.17□□□□□ -1.9
RPA3-203ENST00000401447 ECHDC2Q86YB7 292 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 NAXDQ8IW45 347 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 FAM114A1Q8IWE2 563 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 OR8H2Q8N162 312 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 FBXO39Q8N4B4 442 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 CPSF7Q8N684 471 aaKnown RBP3.17□□□□□ -1.9
RPA3-203ENST00000401447 ZNF383Q8NA42 475 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 OR1J1Q8NGS3 322 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 DEPDC1BQ8WUY9 529 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 TMEM190Q8WZ59 177 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 OR6C1Q96RD1 312 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 GTPBP2Q9BX10 602 aaKnown RBP3.17□□□□□ -1.9
RPA3-203ENST00000401447 CCDC68Q9H2F9 335 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 GHITMQ9H3K2 345 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 FZD8Q9H461 694 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 PXMP2Q9NR77 195 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.17□□□□□ -1.9
RPA3-203ENST00000401447 RHCGQ9UBD6 479 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 OSGIN1Q9UJX0 560 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 GPR34Q9UPC5 381 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 GINS2Q9Y248 185 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 PTRH2Q9Y3E5 179 aaKnown RBP3.17□□□□□ -1.9
RPA3-203ENST00000401447 CELSR2Q9HCU4 2923 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 CCDC168Q8NDH2 2452 aa3.17□□□□□ -1.9
RPA3-203ENST00000401447 STAB1Q9NY15 2570 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 EML5Q05BV3 1969 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 THADAQ6YHU6 1953 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 hCG_1807616A0A1W2PRN6 198 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 OR2A25A4D2G3 310 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 SPECC1L-ADORA2AF8WAN1 911 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 CCER2I3L3R5 266 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 NTN3O00634 580 aaPredicted RBP3.16□□□□□ -1.9
RPA3-203ENST00000401447 SLC22A2O15244 555 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 TSPAN1O60635 241 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 ATP9AO75110 1047 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 STAM2O75886 525 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 EDN1P05305 212 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 HMBSP08397 361 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 SERPINF2P08697 491 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 CD48P09326 243 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 FCARP24071 287 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 CEACAM8P31997 349 aaPredicted RBP3.16□□□□□ -1.9
RPA3-203ENST00000401447 ACSL1P33121 698 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 ACTN2P35609 894 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 KRT20P35900 424 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 SLC11A1P49279 550 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 VEGFCP49767 419 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 CRYBB1P53674 252 aaPredicted RBP3.16□□□□□ -1.9
RPA3-203ENST00000401447 CDK3Q00526 305 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 SEMG2Q02383 582 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 ZFP69Q49AA0 526 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 FAM133BQ5BKY9 247 aaKnown RBP3.16□□□□□ -1.9
RPA3-203ENST00000401447 FFAR4Q5NUL3 377 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 PPM1LQ5SGD2 360 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 GRTP1Q5TC63 336 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 LINGO4Q6UY18 593 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 LPCAT2Q7L5N7 544 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 FAM228AQ86W67 206 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 MFSD6LQ8IWD5 586 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 MINDY1Q8N5J2 469 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 DDHD1Q8NEL9 900 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 APPL2Q8NEU8 664 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 TRIM58Q8NG06 486 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 CTCFLQ8NI51 663 aaPredicted RBP3.16□□□□□ -1.9
RPA3-203ENST00000401447 MOCOSQ96EN8 888 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 MBOAT7Q96N66 472 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 TMEM175Q9BSA9 504 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 LMF2Q9BU23 707 aaKnown RBP3.16□□□□□ -1.9
RPA3-203ENST00000401447 MMP27Q9H306 513 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 DPAGT1Q9H3H5 408 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 PELI2Q9HAT8 420 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 ACKR4Q9NPB9 350 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 STARD5Q9NSY2 213 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 TBC1D13Q9NVG8 400 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 FLRT3Q9NZU0 649 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 STX8Q9UNK0 236 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 ADGRG4Q8IZF6 3080 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 BOD1L1Q8NFC6 3051 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 BAZ2AQ9UIF9 1905 aaKnown RBP3.16□□□□□ -1.9
RPA3-203ENST00000401447 PHLPP2Q6ZVD8 1323 aa3.16□□□□□ -1.9
RPA3-203ENST00000401447 KIF26AQ9ULI4 1882 aaPredicted RBP3.16□□□□□ -1.9
RPA3-203ENST00000401447 BSNQ9UPA5 3926 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms