RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 SNX20Q7Z614 316 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 TMEM150AQ86TG1 271 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 MSRB3Q8IXL7 192 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 RBFAQ8N0V3 343 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 DCAF4L2Q8NA75 395 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 LEMD2Q8NC56 503 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CPT1CQ8TCG5 803 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 GTF2H4Q92759 462 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 RHBDF1Q96CC6 855 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PPP3R2Q96LZ3 170 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 PPM1MQ96MI6 270 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CIPCQ9C0C6 399 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 C11orf54Q9H0W9 315 aaPredicted RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 LIN28AQ9H9Z2 209 aaKnown RBP6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CDH7Q9ULB5 785 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CHST2Q9Y4C5 530 aa6.53□□□□□ -1.36
CSNK2A1-204ENST00000400227 CEP350Q5VT06 3117 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 CENPFP49454 3210 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 TRIM64BA6NI03 449 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 AHRRA9YTQ3 701 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 H0Y626 953 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 MANBAO00462 879 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 SMAD6O43541 496 aaKnown RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 RGS14O43566 566 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 SLC25A14O95258 325 aaPredicted RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 CLIC3O95833 236 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 TRBC1P01850 177 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 CXCL10P02778 98 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 MBL2P11226 248 aaPredicted RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 SLC2A4P14672 509 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ITGALP20701 1170 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 DGKAP23743 735 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 HMOX2P30519 316 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 SHMT2P34897 504 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 HNF1BP35680 557 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 PPP3CCP48454 512 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 RGS4P49798 205 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 HLCSP50747 726 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ALDH3A2P51648 485 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 MTPNP58546 118 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ESRRGP62508 458 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 CREMQ03060 361 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 PMS2P3Q13401 168 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 NFATC2Q13469 925 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 BIRC2Q13490 618 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 TUBA3CQ13748 450 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 DAG1Q14118 895 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 CHRNA6Q15825 494 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 PHKG1Q16816 387 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 RUNDC3AQ59EK9 446 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 CCNYL2Q5T2Q4 361 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 TUBA3EQ6PEY2 450 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 GDF7Q7Z4P5 450 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 GPR180Q86V85 440 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 CLVS1Q8IUQ0 354 aaPredicted RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 OFCC1Q8IZS5 231 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 APCDD1Q8J025 514 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 AADATQ8N5Z0 425 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZBTB2Q8N680 514 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZNF548Q8NEK5 533 aaPredicted RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 OR52E4Q8NGH9 312 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 B4GALNT2Q8NHY0 566 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZNF461Q8TAF7 563 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 CD99L2Q8TCZ2 262 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 MAGEE2Q8TD90 523 aaPredicted RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 SLC13A3Q8WWT9 602 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 TMBIM1Q969X1 311 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 VOPP1Q96AW1 172 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ISOC1Q96CN7 298 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 IGSF21Q96ID5 467 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 VPS50Q96JG6 964 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 RNF145Q96MT1 663 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 SLC22A12Q96S37 553 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 HBEGFQ99075 208 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZBTB18Q99592 522 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 SEPHS2Q99611 448 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 DOK1Q99704 481 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 C17orf80Q9BSJ5 609 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 NTMT1Q9BV86 223 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 SLC29A3Q9BZD2 475 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 HIPK3Q9H422 1215 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ASB8Q9H765 288 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 GORASP2Q9H8Y8 452 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 RDH14Q9HBH5 336 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZNF334Q9HCZ1 680 aaPredicted RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 IL26Q9NPH9 171 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 FBXO34Q9NWN3 711 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 VAPAQ9P0L0 249 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 KLHL42Q9P2K6 505 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 PNMA8BQ9ULN7 279 aaPredicted RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 EIF3LQ9Y262 564 aaKnown RBP6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 AP3M1Q9Y2T2 418 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 V9GYQ6 96 aa6.52□□□□□ -1.37
CSNK2A1-204ENST00000400227 MYOFQ9NZM1 2061 aa6.51□□□□□ -1.37
CSNK2A1-204ENST00000400227 KCNE1BA0A087WTH5 132 aa6.51□□□□□ -1.37
CSNK2A1-204ENST00000400227 C1orf232A0A0U1RR37 186 aa6.51□□□□□ -1.37
CSNK2A1-204ENST00000400227 K7EPI3 171 aa6.51□□□□□ -1.37
CSNK2A1-204ENST00000400227 SOCS5O75159 536 aa6.51□□□□□ -1.37
CSNK2A1-204ENST00000400227 ZNF821O75541 412 aaPredicted RBP6.51□□□□□ -1.37
CSNK2A1-204ENST00000400227 SCELO95171 688 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms